RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 GPX3P22352 226 aa15.56■□□□□ 0.08
TRIM28-215ENST00000601150 NTSP30990 170 aa15.56■□□□□ 0.08
TRIM28-215ENST00000601150 MEOX1P50221 254 aa15.56■□□□□ 0.08
TRIM28-215ENST00000601150 MRPS35P82673 323 aaKnown RBP15.56■□□□□ 0.08
TRIM28-215ENST00000601150 ALDH6A1Q02252 535 aaKnown RBP15.56■□□□□ 0.08
TRIM28-215ENST00000601150 PDCD2Q16342 344 aaPredicted RBP15.56■□□□□ 0.08
TRIM28-215ENST00000601150 EIF2S3LQ2VIR3 472 aaKnown RBP15.56■□□□□ 0.08
TRIM28-215ENST00000601150 C6orf136Q5SQH8 315 aa15.56■□□□□ 0.08
TRIM28-215ENST00000601150 LYPD8Q6UX82 237 aa15.56■□□□□ 0.08
TRIM28-215ENST00000601150 CPSF7Q8N684 471 aaKnown RBP15.56■□□□□ 0.08
TRIM28-215ENST00000601150 C17orf47Q8NEP4 570 aa15.56■□□□□ 0.08
TRIM28-215ENST00000601150 OR52R1Q8NGF1 315 aa15.56■□□□□ 0.08
TRIM28-215ENST00000601150 KAT2AQ92830 837 aa15.56■□□□□ 0.08
TRIM28-215ENST00000601150 GFM2Q969S9 779 aaKnown RBP15.56■□□□□ 0.08
TRIM28-215ENST00000601150 SPACA9Q96E40 222 aaPredicted RBP15.56■□□□□ 0.08
TRIM28-215ENST00000601150 ZNF764Q96H86 408 aaPredicted RBP15.56■□□□□ 0.08
TRIM28-215ENST00000601150 REEP4Q9H6H4 257 aa15.56■□□□□ 0.08
TRIM28-215ENST00000601150 VIPAS39Q9H9C1 493 aa15.56■□□□□ 0.08
TRIM28-215ENST00000601150 PRODH2Q9UF12 536 aa15.56■□□□□ 0.08
TRIM28-215ENST00000601150 BAIAP2L1Q9UHR4 511 aa15.56■□□□□ 0.08
TRIM28-215ENST00000601150 CAPN14A8MX76 684 aa15.55■□□□□ 0.08
TRIM28-215ENST00000601150 AKAP10O43572 662 aa15.55■□□□□ 0.08
TRIM28-215ENST00000601150 TBX19O60806 448 aa15.55■□□□□ 0.08
TRIM28-215ENST00000601150 SLITRK5O94991 958 aa15.55■□□□□ 0.08
TRIM28-215ENST00000601150 LRATO95237 230 aa15.55■□□□□ 0.08
TRIM28-215ENST00000601150 JUNP05412 331 aaKnown RBP15.55■□□□□ 0.08
TRIM28-215ENST00000601150 FBXO45P0C2W1 286 aa15.55■□□□□ 0.08
TRIM28-215ENST00000601150 NCBP2P52298 156 aaKnown RBP eCLIP15.55■□□□□ 0.08
TRIM28-215ENST00000601150 NRG3P56975 720 aa15.55■□□□□ 0.08
TRIM28-215ENST00000601150 GPR85P60893 370 aa15.55■□□□□ 0.08
TRIM28-215ENST00000601150 SRSF11Q05519 484 aaKnown RBP15.55■□□□□ 0.08
TRIM28-215ENST00000601150 DUSP8Q13202 625 aa15.55■□□□□ 0.08
TRIM28-215ENST00000601150 TRIM42Q8IWZ5 723 aa15.55■□□□□ 0.08
TRIM28-215ENST00000601150 FNDC5Q8NAU1 212 aa15.55■□□□□ 0.08
TRIM28-215ENST00000601150 SIMC1Q8NDZ2 872 aa15.55■□□□□ 0.08
TRIM28-215ENST00000601150 CLHC1Q8NHS4 586 aa15.55■□□□□ 0.08
TRIM28-215ENST00000601150 PRR7Q8TB68 274 aa15.55■□□□□ 0.08
TRIM28-215ENST00000601150 RAB3IL1Q8TBN0 382 aa15.55■□□□□ 0.08
TRIM28-215ENST00000601150 PPCDCQ96CD2 204 aa15.55■□□□□ 0.08
TRIM28-215ENST00000601150 MTERF3Q96E29 417 aa15.55■□□□□ 0.08
TRIM28-215ENST00000601150 ATP6V1G3Q96LB4 118 aa15.55■□□□□ 0.08
TRIM28-215ENST00000601150 SACM1LQ9NTJ5 587 aa15.55■□□□□ 0.08
TRIM28-215ENST00000601150 SEC14L3Q9UDX4 400 aa15.55■□□□□ 0.08
TRIM28-215ENST00000601150 DTX4Q9Y2E6 619 aa15.55■□□□□ 0.08
TRIM28-215ENST00000601150 PLOD3O60568 738 aa15.54■□□□□ 0.08
TRIM28-215ENST00000601150 P04436 131 aa15.54■□□□□ 0.08
TRIM28-215ENST00000601150 PRPS2P11908 318 aa15.54■□□□□ 0.08
TRIM28-215ENST00000601150 ZNF24P17028 368 aa15.54■□□□□ 0.08
TRIM28-215ENST00000601150 CNR1P21554 472 aa15.54■□□□□ 0.08
TRIM28-215ENST00000601150 HPCAL1P37235 193 aa15.54■□□□□ 0.08
TRIM28-215ENST00000601150 EMDP50402 254 aa15.54■□□□□ 0.08
TRIM28-215ENST00000601150 DCAF7P61962 342 aa15.54■□□□□ 0.08
TRIM28-215ENST00000601150 MAD2L1Q13257 205 aaPredicted RBP15.54■□□□□ 0.08
TRIM28-215ENST00000601150 PDE7AQ13946 482 aa15.54■□□□□ 0.08
TRIM28-215ENST00000601150 FHL5Q5TD97 284 aa15.54■□□□□ 0.08
TRIM28-215ENST00000601150 ATG16L1Q676U5 607 aa15.54■□□□□ 0.08
TRIM28-215ENST00000601150 ANKRD26P1Q6NSI1 321 aa15.54■□□□□ 0.08
TRIM28-215ENST00000601150 GFRALQ6UXV0 394 aa15.54■□□□□ 0.08
TRIM28-215ENST00000601150 R3HCC1LQ7Z5L2 792 aaKnown RBP15.54■□□□□ 0.08
TRIM28-215ENST00000601150 LIX1Q8N485 282 aa15.54■□□□□ 0.08
TRIM28-215ENST00000601150 GOLGA6L1Q8N7Z2 621 aa15.54■□□□□ 0.08
TRIM28-215ENST00000601150 ZFP62Q8NB50 900 aaPredicted RBP15.54■□□□□ 0.08
TRIM28-215ENST00000601150 FAM13CQ8NE31 585 aa15.54■□□□□ 0.08
TRIM28-215ENST00000601150 OR2M7Q8NG81 312 aa15.54■□□□□ 0.08
TRIM28-215ENST00000601150 LCORQ96JN0 433 aaPredicted RBP15.54■□□□□ 0.08
TRIM28-215ENST00000601150 AMDHD1Q96NU7 426 aa15.54■□□□□ 0.08
TRIM28-215ENST00000601150 C1orf50Q9BV19 199 aa15.54■□□□□ 0.08
TRIM28-215ENST00000601150 ITPAQ9BY32 194 aa15.54■□□□□ 0.08
TRIM28-215ENST00000601150 NXF5Q9H1B4 397 aaKnown RBP15.54■□□□□ 0.08
TRIM28-215ENST00000601150 ANKRA2Q9H9E1 313 aa15.54■□□□□ 0.08
TRIM28-215ENST00000601150 DEPPQ9NTK1 212 aa15.54■□□□□ 0.08
TRIM28-215ENST00000601150 THAP1Q9NVV9 213 aa15.54■□□□□ 0.08
TRIM28-215ENST00000601150 NPFFR2Q9Y5X5 522 aa15.54■□□□□ 0.08
TRIM28-215ENST00000601150 CLEC18AA5D8T8 446 aa15.53■□□□□ 0.08
TRIM28-215ENST00000601150 PDPK1O15530 556 aa15.53■□□□□ 0.08
TRIM28-215ENST00000601150 UNC5CO95185 931 aa15.53■□□□□ 0.08
TRIM28-215ENST00000601150 CCL3P10147 92 aa15.53■□□□□ 0.08
TRIM28-215ENST00000601150 DDX5P17844 614 aaKnown RBP15.53■□□□□ 0.08
TRIM28-215ENST00000601150 DRD5P21918 477 aa15.53■□□□□ 0.08
TRIM28-215ENST00000601150 RPL3P39023 403 aaKnown RBP15.53■□□□□ 0.08
TRIM28-215ENST00000601150 PPICP45877 212 aa15.53■□□□□ 0.08
TRIM28-215ENST00000601150 TMED10P49755 219 aaKnown RBP15.53■□□□□ 0.08
TRIM28-215ENST00000601150 KCNK10P57789 538 aa15.53■□□□□ 0.08
TRIM28-215ENST00000601150 NTRK2Q16620 822 aa15.53■□□□□ 0.08
TRIM28-215ENST00000601150 SMU1Q2TAY7 513 aa15.53■□□□□ 0.08
TRIM28-215ENST00000601150 KRTCAP3Q53RY4 240 aa15.53■□□□□ 0.08
TRIM28-215ENST00000601150 RNFT1Q5M7Z0 435 aa15.53■□□□□ 0.08
TRIM28-215ENST00000601150 IL23RQ5VWK5 629 aa15.53■□□□□ 0.08
TRIM28-215ENST00000601150 SLC22A10Q63ZE4 541 aa15.53■□□□□ 0.08
TRIM28-215ENST00000601150 CLEC18BQ6UXF7 455 aa15.53■□□□□ 0.08
TRIM28-215ENST00000601150 TMEM64Q6YI46 380 aa15.53■□□□□ 0.08
TRIM28-215ENST00000601150 GK5Q6ZS86 529 aa15.53■□□□□ 0.08
TRIM28-215ENST00000601150 SIAH3Q8IW03 269 aa15.53■□□□□ 0.08
TRIM28-215ENST00000601150 FAM26EQ8N5C1 309 aa15.53■□□□□ 0.08
TRIM28-215ENST00000601150 CLEC18CQ8NCF0 446 aa15.53■□□□□ 0.08
TRIM28-215ENST00000601150 OR7G2Q8NG99 324 aa15.53■□□□□ 0.08
TRIM28-215ENST00000601150 OR10G3Q8NGC4 313 aa15.53■□□□□ 0.08
TRIM28-215ENST00000601150 ZFP28Q8NHY6 868 aa15.53■□□□□ 0.08
TRIM28-215ENST00000601150 PAQR8Q8TEZ7 354 aa15.53■□□□□ 0.08
TRIM28-215ENST00000601150 HSPBAP1Q96EW2 488 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms