RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 PAGE2Q7Z2X7 111 aa21■□□□□ 0.95
CCDC61-207ENST00000599044 SPPL2AQ8TCT8 520 aa21■□□□□ 0.95
CCDC61-207ENST00000599044 CHTF18Q8WVB6 975 aa21■□□□□ 0.95
CCDC61-207ENST00000599044 SARAFQ96BY9 339 aa21■□□□□ 0.95
CCDC61-207ENST00000599044 ACKR4Q9NPB9 350 aa21■□□□□ 0.95
CCDC61-207ENST00000599044 ANKRD33BA6NCL7 494 aa20.99■□□□□ 0.95
CCDC61-207ENST00000599044 KDM4EB2RXH2 506 aaPredicted RBP20.99■□□□□ 0.95
CCDC61-207ENST00000599044 DLX3O60479 287 aa20.99■□□□□ 0.95
CCDC61-207ENST00000599044 GPX3P22352 226 aa20.99■□□□□ 0.95
CCDC61-207ENST00000599044 EXOSC7Q15024 291 aaKnown RBP20.99■□□□□ 0.95
CCDC61-207ENST00000599044 RPS6KA2Q15349 733 aa20.99■□□□□ 0.95
CCDC61-207ENST00000599044 PRICKLE4Q2TBC4 344 aa20.99■□□□□ 0.95
CCDC61-207ENST00000599044 ZNF678Q5SXM1 525 aa20.99■□□□□ 0.95
CCDC61-207ENST00000599044 C1orf185Q5T7R7 199 aa20.99■□□□□ 0.95
CCDC61-207ENST00000599044 HLA-DQA1Q5Y7H0 255 aa20.99■□□□□ 0.95
CCDC61-207ENST00000599044 C1orf52Q8N6N3 182 aaKnown RBP20.99■□□□□ 0.95
CCDC61-207ENST00000599044 CDYL2Q8N8U2 506 aa20.99■□□□□ 0.95
CCDC61-207ENST00000599044 ADCY4Q8NFM4 1077 aa20.99■□□□□ 0.95
CCDC61-207ENST00000599044 NEIL3Q8TAT5 605 aa20.99■□□□□ 0.95
CCDC61-207ENST00000599044 TMEM237Q96Q45 408 aa20.99■□□□□ 0.95
CCDC61-207ENST00000599044 NXF5Q9H1B4 397 aaKnown RBP20.99■□□□□ 0.95
CCDC61-207ENST00000599044 BRF2Q9HAW0 419 aa20.99■□□□□ 0.95
CCDC61-207ENST00000599044 MCCC2Q9HCC0 563 aa20.99■□□□□ 0.95
CCDC61-207ENST00000599044 MAT2BQ9NZL9 334 aa20.99■□□□□ 0.95
CCDC61-207ENST00000599044 TRPS1Q9UHF7 1281 aa20.99■□□□□ 0.95
CCDC61-207ENST00000599044 ITGB1BP2Q9UKP3 347 aa20.99■□□□□ 0.95
CCDC61-207ENST00000599044 SNX6Q9UNH7 406 aa20.99■□□□□ 0.95
CCDC61-207ENST00000599044 MTORP42345 2549 aa20.98■□□□□ 0.95
CCDC61-207ENST00000599044 C1orf226A1L170 272 aa20.98■□□□□ 0.95
CCDC61-207ENST00000599044 MANBAO00462 879 aa20.98■□□□□ 0.95
CCDC61-207ENST00000599044 WDR1O75083 606 aa20.98■□□□□ 0.95
CCDC61-207ENST00000599044 ERLIN1O75477 346 aa20.98■□□□□ 0.95
CCDC61-207ENST00000599044 ERAL1O75616 437 aaKnown RBP20.98■□□□□ 0.95
CCDC61-207ENST00000599044 SUPT7LO94864 414 aa20.98■□□□□ 0.95
CCDC61-207ENST00000599044 NUDT17P0C025 328 aa20.98■□□□□ 0.95
CCDC61-207ENST00000599044 NNATQ16517 81 aa20.98■□□□□ 0.95
CCDC61-207ENST00000599044 BEND6Q5SZJ8 279 aaPredicted RBP20.98■□□□□ 0.95
CCDC61-207ENST00000599044 SEM1Q6ZVN7 128 aa20.98■□□□□ 0.95
CCDC61-207ENST00000599044 DMRTC2Q8IXT2 367 aaPredicted RBP20.98■□□□□ 0.95
CCDC61-207ENST00000599044 OR7G1Q8NGA0 311 aa20.98■□□□□ 0.95
CCDC61-207ENST00000599044 NTNG2Q96CW9 530 aa20.98■□□□□ 0.95
CCDC61-207ENST00000599044 RILPQ96NA2 401 aa20.98■□□□□ 0.95
CCDC61-207ENST00000599044 GNRHR2Q96P88 292 aa20.98■□□□□ 0.95
CCDC61-207ENST00000599044 ANGPTL4Q9BY76 406 aa20.98■□□□□ 0.95
CCDC61-207ENST00000599044 BRINP2Q9C0B6 783 aa20.98■□□□□ 0.95
CCDC61-207ENST00000599044 HEY2Q9UBP5 337 aa20.98■□□□□ 0.95
CCDC61-207ENST00000599044 FETUBQ9UGM5 382 aa20.98■□□□□ 0.95
CCDC61-207ENST00000599044 ZNF639Q9UID6 485 aa20.98■□□□□ 0.95
CCDC61-207ENST00000599044 GOLGA8RI6L899 631 aa20.97■□□□□ 0.95
CCDC61-207ENST00000599044 GDF1P27539 372 aa20.97■□□□□ 0.95
CCDC61-207ENST00000599044 ABCD3P28288 659 aa20.97■□□□□ 0.95
CCDC61-207ENST00000599044 CASP3P42574 277 aa20.97■□□□□ 0.95
CCDC61-207ENST00000599044 SLCO1A2P46721 670 aa20.97■□□□□ 0.95
CCDC61-207ENST00000599044 ZFP36L2P47974 494 aaKnown RBP20.97■□□□□ 0.95
CCDC61-207ENST00000599044 MAP4K2Q12851 820 aa20.97■□□□□ 0.95
CCDC61-207ENST00000599044 LTB4RQ15722 352 aa20.97■□□□□ 0.95
CCDC61-207ENST00000599044 TRMT12Q53H54 448 aaKnown RBP20.97■□□□□ 0.95
CCDC61-207ENST00000599044 TMEM198Q66K66 360 aa20.97■□□□□ 0.95
CCDC61-207ENST00000599044 VWA5B2Q8N398 1253 aa20.97■□□□□ 0.95
CCDC61-207ENST00000599044 EPS8L3Q8TE67 593 aaKnown RBP20.97■□□□□ 0.95
CCDC61-207ENST00000599044 CNRIP1Q96F85 164 aaPredicted RBP20.97■□□□□ 0.95
CCDC61-207ENST00000599044 ZNF597Q96LX8 424 aa20.97■□□□□ 0.95
CCDC61-207ENST00000599044 ZNF681Q96N22 645 aa20.97■□□□□ 0.95
CCDC61-207ENST00000599044 QPCTLQ9NXS2 382 aa20.97■□□□□ 0.95
CCDC61-207ENST00000599044 SMIM23A6NLE4 172 aa20.96■□□□□ 0.95
CCDC61-207ENST00000599044 TP53I11O14683 189 aa20.96■□□□□ 0.95
CCDC61-207ENST00000599044 CBX7O95931 251 aa20.96■□□□□ 0.95
CCDC61-207ENST00000599044 ATP1B1P05026 303 aa20.96■□□□□ 0.95
CCDC61-207ENST00000599044 ABCB1P08183 1280 aaPredicted RBP20.96■□□□□ 0.95
CCDC61-207ENST00000599044 HOXD4P09016 255 aaPredicted RBP20.96■□□□□ 0.95
CCDC61-207ENST00000599044 HTR6P50406 440 aa20.96■□□□□ 0.95
CCDC61-207ENST00000599044 DLX5P56178 289 aa20.96■□□□□ 0.95
CCDC61-207ENST00000599044 WNT3P56703 355 aa20.96■□□□□ 0.95
CCDC61-207ENST00000599044 RAE1P78406 368 aaKnown RBP20.96■□□□□ 0.95
CCDC61-207ENST00000599044 LGSNQ5TDP6 509 aa20.96■□□□□ 0.95
CCDC61-207ENST00000599044 ULK2Q8IYT8 1036 aa20.96■□□□□ 0.95
CCDC61-207ENST00000599044 KLHL29Q96CT2 875 aa20.96■□□□□ 0.95
CCDC61-207ENST00000599044 ITPAQ9BY32 194 aa20.96■□□□□ 0.95
CCDC61-207ENST00000599044 UBQLN3Q9H347 655 aa20.96■□□□□ 0.95
CCDC61-207ENST00000599044 ANKRA2Q9H9E1 313 aa20.96■□□□□ 0.95
CCDC61-207ENST00000599044 VPS29Q9UBQ0 182 aa20.96■□□□□ 0.95
CCDC61-207ENST00000599044 BCAP29Q9UHQ4 241 aa20.96■□□□□ 0.95
CCDC61-207ENST00000599044 CAPN14A8MX76 684 aa20.95■□□□□ 0.94
CCDC61-207ENST00000599044 FOXO6A8MYZ6 492 aa20.95■□□□□ 0.94
CCDC61-207ENST00000599044 GUCY1B2O75343 617 aa20.95■□□□□ 0.94
CCDC61-207ENST00000599044 NME6O75414 186 aaPredicted RBP20.95■□□□□ 0.94
CCDC61-207ENST00000599044 TRAPPC6AO75865 159 aa20.95■□□□□ 0.94
CCDC61-207ENST00000599044 CSNK2A2P19784 350 aaPredicted RBP20.95■□□□□ 0.94
CCDC61-207ENST00000599044 IMPDH1P20839 514 aa20.95■□□□□ 0.94
CCDC61-207ENST00000599044 ALDH9A1P49189 494 aa20.95■□□□□ 0.94
CCDC61-207ENST00000599044 TBCELQ5QJ74 424 aa20.95■□□□□ 0.94
CCDC61-207ENST00000599044 LIX1Q8N485 282 aa20.95■□□□□ 0.94
CCDC61-207ENST00000599044 C17orf47Q8NEP4 570 aa20.95■□□□□ 0.94
CCDC61-207ENST00000599044 CTHRC1Q96CG8 243 aa20.95■□□□□ 0.94
CCDC61-207ENST00000599044 MTBPQ96DY7 904 aa20.95■□□□□ 0.94
CCDC61-207ENST00000599044 ZNF382Q96SR6 550 aa20.95■□□□□ 0.94
CCDC61-207ENST00000599044 TIMP4Q99727 224 aa20.95■□□□□ 0.94
CCDC61-207ENST00000599044 RYDENQ9NUL5 291 aaKnown RBP20.95■□□□□ 0.94
CCDC61-207ENST00000599044 PSMC3IPQ9P2W1 217 aaPredicted RBP20.95■□□□□ 0.94
CCDC61-207ENST00000599044 B4GALT7Q9UBV7 327 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms