RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 SEMA7AO75326 666 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 ATP6AP2O75787 350 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 SNUPNO95149 360 aaKnown RBP15.43■□□□□ 0.06
SSBP4-204ENST00000597724 UNC5CO95185 931 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 ZNF24P17028 368 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 CNR1P21554 472 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 BGNP21810 368 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 SLC18A1P54219 525 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 WDR4P57081 412 aaKnown RBP15.43■□□□□ 0.06
SSBP4-204ENST00000597724 KCNK10P57789 538 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 KRTCAP3Q53RY4 240 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 HHATQ5VTY9 493 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 GFRALQ6UXV0 394 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 ZNF781Q8N8C0 355 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 ANKRD42Q8N9B4 389 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 OR2M7Q8NG81 312 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 OR9A2Q8NGT5 310 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 PAQR8Q8TEZ7 354 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 KAT2AQ92830 837 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 ZNF764Q96H86 408 aaPredicted RBP15.43■□□□□ 0.06
SSBP4-204ENST00000597724 PPP3R2Q96LZ3 170 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 GPR137Q96N19 417 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 PAIP2Q9BPZ3 127 aaKnown RBP15.43■□□□□ 0.06
SSBP4-204ENST00000597724 C20orf27Q9GZN8 174 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 TSPAN10Q9H1Z9 355 aaPredicted RBP15.43■□□□□ 0.06
SSBP4-204ENST00000597724 SH2D2AQ9NP31 389 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 SACM1LQ9NTJ5 587 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 BAIAP2L1Q9UHR4 511 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 OSGIN2Q9Y236 505 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.43■□□□□ 0.06
SSBP4-204ENST00000597724 EML6Q6ZMW3 1958 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 USP9YO00507 2555 aaPredicted RBP15.43■□□□□ 0.06
SSBP4-204ENST00000597724 HECTD1Q9ULT8 2610 aa15.43■□□□□ 0.06
SSBP4-204ENST00000597724 PTPN13Q12923 2485 aa15.42■□□□□ 0.06
SSBP4-204ENST00000597724 NPIPA5E9PKD4 350 aa15.42■□□□□ 0.06
SSBP4-204ENST00000597724 PLOD3O60568 738 aa15.42■□□□□ 0.06
SSBP4-204ENST00000597724 SKAP2O75563 359 aaPredicted RBP15.42■□□□□ 0.06
SSBP4-204ENST00000597724 BCAS2O75934 225 aaPredicted RBP15.42■□□□□ 0.06
SSBP4-204ENST00000597724 P04436 131 aa15.42■□□□□ 0.06
SSBP4-204ENST00000597724 CCL3P10147 92 aa15.42■□□□□ 0.06
SSBP4-204ENST00000597724 BCKDHAP12694 445 aa15.42■□□□□ 0.06
SSBP4-204ENST00000597724 RFC3P40938 356 aa15.42■□□□□ 0.06
SSBP4-204ENST00000597724 SLC1A6P48664 564 aa15.42■□□□□ 0.06
SSBP4-204ENST00000597724 EMDP50402 254 aa15.42■□□□□ 0.06
SSBP4-204ENST00000597724 NTRK2Q16620 822 aa15.42■□□□□ 0.06
SSBP4-204ENST00000597724 C6orf136Q5SQH8 315 aa15.42■□□□□ 0.06
SSBP4-204ENST00000597724 SLC22A10Q63ZE4 541 aa15.42■□□□□ 0.06
SSBP4-204ENST00000597724 TMEM64Q6YI46 380 aa15.42■□□□□ 0.06
SSBP4-204ENST00000597724 FAM9CQ8IZT9 166 aa15.42■□□□□ 0.06
SSBP4-204ENST00000597724 OR52R1Q8NGF1 315 aa15.42■□□□□ 0.06
SSBP4-204ENST00000597724 GFM2Q969S9 779 aaKnown RBP15.42■□□□□ 0.06
SSBP4-204ENST00000597724 TSSK3Q96PN8 268 aa15.42■□□□□ 0.06
SSBP4-204ENST00000597724 SORT1Q99523 831 aa15.42■□□□□ 0.06
SSBP4-204ENST00000597724 NXF5Q9H1B4 397 aaKnown RBP15.42■□□□□ 0.06
SSBP4-204ENST00000597724 ANKRA2Q9H9E1 313 aa15.42■□□□□ 0.06
SSBP4-204ENST00000597724 GIMAP2Q9UG22 337 aa15.42■□□□□ 0.06
SSBP4-204ENST00000597724 HAO1Q9UJM8 370 aa15.42■□□□□ 0.06
SSBP4-204ENST00000597724 NPIPA1Q9UND3 350 aa15.42■□□□□ 0.06
SSBP4-204ENST00000597724 RAP2CQ9Y3L5 183 aa15.42■□□□□ 0.06
SSBP4-204ENST00000597724 NPFFR2Q9Y5X5 522 aa15.42■□□□□ 0.06
SSBP4-204ENST00000597724 A0A0G2JMM0 328 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 A0A1W2PPB8 328 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 A0A1W2PRS3 328 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 PINLYPA6NC86 204 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 KIR3DP1A8MWS1 328 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 G3V3Y1 287 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 ASNA1O43681 348 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 TBX19O60806 448 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 AGFG2O95081 481 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 JUNP05412 331 aaKnown RBP15.41■□□□□ 0.06
SSBP4-204ENST00000597724 STSP08842 583 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 MAPK1P28482 360 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 PPICP45877 212 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 ASMTP46597 345 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 NCBP2P52298 156 aaKnown RBP eCLIP15.41■□□□□ 0.06
SSBP4-204ENST00000597724 NRG3P56975 720 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 BST1Q10588 318 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 STX3Q13277 289 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 ATP6AP1LQ52LC2 224 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 FAM13CQ8NE31 585 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 OR7G2Q8NG99 324 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 OR10G3Q8NGC4 313 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 CLHC1Q8NHS4 586 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 FAM173AQ9BQD7 235 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 ITPAQ9BY32 194 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 GLIPR2Q9H4G4 154 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 REEP4Q9H6H4 257 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 CNIH4Q9P003 139 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 PRODH2Q9UF12 536 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 ERRFI1Q9UJM3 462 aaPredicted RBP15.41■□□□□ 0.06
SSBP4-204ENST00000597724 SLC5A6Q9Y289 635 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 CHCHD2Q9Y6H1 151 aaPredicted RBP15.41■□□□□ 0.06
SSBP4-204ENST00000597724 DOPEY2Q9Y3R5 2298 aa15.41■□□□□ 0.06
SSBP4-204ENST00000597724 CAPN14A8MX76 684 aa15.4■□□□□ 0.06
SSBP4-204ENST00000597724 AKAP10O43572 662 aa15.4■□□□□ 0.06
SSBP4-204ENST00000597724 SLITRK5O94991 958 aa15.4■□□□□ 0.06
SSBP4-204ENST00000597724 LRATO95237 230 aa15.4■□□□□ 0.06
SSBP4-204ENST00000597724 DRD5P21918 477 aa15.4■□□□□ 0.06
SSBP4-204ENST00000597724 ABCD3P28288 659 aa15.4■□□□□ 0.06
SSBP4-204ENST00000597724 NTSP30990 170 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms