RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 CCDC120Q96HB5 630 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 METTL2AQ96IZ6 378 aaKnown RBP17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 DEFB127Q9H1M4 99 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 SLC35C2Q9NQQ7 365 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 TUBA8Q9NY65 449 aaPredicted RBP17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 EHD3Q9NZN3 535 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 CNOT11Q9UKZ1 510 aaKnown RBP17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 POLR3HQ9Y535 204 aaPredicted RBP17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 DNAJC15Q9Y5T4 150 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 NPFFR2Q9Y5X5 522 aa17.02■□□□□ 0.32
SHKBP1-202ENST00000593764 NAV2Q8IVL1 2488 aa17.02■□□□□ 0.31
SHKBP1-202ENST00000593764 A0A1B0GTH9 108 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 FAM166BA8MTA8 275 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 SLC28A1O00337 649 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 PDE9AO76083 593 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 DDCP20711 480 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 COL8A1P27658 744 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 EMDP50402 254 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 PLGLB1Q02325 96 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 C2orf80Q0P641 193 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 KRT71Q3SY84 523 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 HLA-DQA1Q5Y7H0 255 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 KANK2Q63ZY3 851 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 RGS9BPQ6ZS82 235 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 ZCCHC23Q6ZST2 131 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 DOLPP1Q86YN1 238 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 SAMD14Q8IZD0 417 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 FBXW8Q8N3Y1 598 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 TMEM251Q8N6I4 163 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 FAM13CQ8NE31 585 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 OR52R1Q8NGF1 315 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 OR6Y1Q8NGX8 325 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 NXF5Q9H1B4 397 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 ANKRA2Q9H9E1 313 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 IL1RL2Q9HB29 575 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 MYNNQ9NPC7 610 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 TAS2R7Q9NYW3 318 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 CNIH4Q9P003 139 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 BCAP29Q9UHQ4 241 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 HRH3Q9Y5N1 445 aa17.01■□□□□ 0.31
SHKBP1-202ENST00000593764 TMEM233B4DJY2 109 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 MAST4O15021 2626 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 CDC40O60508 579 aaKnown RBP eCLIP17■□□□□ 0.31
SHKBP1-202ENST00000593764 SEC22BO75396 215 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 TUBBP07437 444 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 BPGMP07738 259 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 ABOP16442 354 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 TACR1P25103 407 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 CASP6P55212 293 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 FBXW4P57775 412 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 TNFAIP8L3Q5GJ75 292 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 PRAMEF20Q5VT98 475 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 SLC22A16Q86VW1 577 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 OR5M3Q8NGP4 307 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 OR9A2Q8NGT5 310 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 ITLN2Q8WWU7 325 aaPredicted RBP17■□□□□ 0.31
SHKBP1-202ENST00000593764 KAT2AQ92830 837 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 EGLN2Q96KS0 407 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 FCRL1Q96LA6 429 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 PHF12Q96QT6 1004 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 ITPAQ9BY32 194 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 PFDN4Q9NQP4 134 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 C1orf109Q9NX04 203 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 SENP1Q9P0U3 644 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 CFL2Q9Y281 166 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 WBP11Q9Y2W2 641 aaKnown RBP17■□□□□ 0.31
SHKBP1-202ENST00000593764 FIS1Q9Y3D6 152 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 TRAF6Q9Y4K3 522 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 SEC23IPQ9Y6Y8 1000 aaKnown RBP17■□□□□ 0.31
SHKBP1-202ENST00000593764 UNC79Q9P2D8 2635 aa17■□□□□ 0.31
SHKBP1-202ENST00000593764 CELSR2Q9HCU4 2923 aa16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 ANKRD33BA6NCL7 494 aa16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 MYO1GB0I1T2 1018 aa16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 ACOT7O00154 380 aa16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 ADAM10O14672 748 aa16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 RGS16O15492 202 aaPredicted RBP16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 RGS14O43566 566 aa16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 LRATO95237 230 aa16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 LINC00032P0C843 101 aa16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 ABCD3P28288 659 aa16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 PTGS2P35354 604 aa16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 MAGEA5P43359 124 aa16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 ADORA2A-AS1P86434 159 aa16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 RPS6KA2Q15349 733 aa16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 CES4AQ5XG92 561 aa16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 EXOC3L1Q86VI1 746 aa16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 TICAM1Q8IUC6 712 aa16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 PRR22Q8IZ63 422 aa16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 CLYBLQ8N0X4 340 aa16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 CDC26Q8NHZ8 85 aa16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 NTNG2Q96CW9 530 aa16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 ERP27Q96DN0 273 aa16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 ZIM3Q96PE6 472 aa16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 LRTM1Q9HBL6 345 aa16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 SUCOQ9UBS9 1254 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 ENTPD4Q9Y227 616 aa16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 MEMO1Q9Y316 297 aa16.99■□□□□ 0.31
SHKBP1-202ENST00000593764 CENPEQ02224 2701 aa16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 NCOA6Q14686 2063 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-202ENST00000593764 LRRC3CA6NJW4 275 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms