RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 C3orf14Q9HBI5 128 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 NECTIN3Q9NQS3 549 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 WSB2Q9NYS7 404 aaPredicted RBP18.53■□□□□ 0.56
CLIP3-206ENST00000593074 REV1Q9UBZ9 1251 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 KLK4Q9Y5K2 254 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 P2RX6O15547 441 aa18.52■□□□□ 0.56
CLIP3-206ENST00000593074 EPPINO95925 133 aa18.52■□□□□ 0.56
CLIP3-206ENST00000593074 NR4A1P22736 598 aa18.52■□□□□ 0.56
CLIP3-206ENST00000593074 MAN2A2P49641 1150 aa18.52■□□□□ 0.56
CLIP3-206ENST00000593074 DGCR6Q14129 220 aa18.52■□□□□ 0.56
CLIP3-206ENST00000593074 FCRL6Q6DN72 434 aa18.52■□□□□ 0.56
CLIP3-206ENST00000593074 DGLUCYQ7Z3D6 616 aa18.52■□□□□ 0.56
CLIP3-206ENST00000593074 GSDMCQ9BYG8 508 aa18.52■□□□□ 0.56
CLIP3-206ENST00000593074 LMAN1LQ9HAT1 526 aa18.52■□□□□ 0.56
CLIP3-206ENST00000593074 ACTR10Q9NZ32 417 aa18.52■□□□□ 0.56
CLIP3-206ENST00000593074 PILRAQ9UKJ1 303 aa18.52■□□□□ 0.56
CLIP3-206ENST00000593074 DUSP12Q9UNI6 340 aa18.52■□□□□ 0.56
CLIP3-206ENST00000593074 SLC9A8Q9Y2E8 581 aa18.52■□□□□ 0.56
CLIP3-206ENST00000593074 A0A1W2PRQ8 180 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 CHURC1-FNTBB4DL54 471 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 M0R3H8 397 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 CASC3O15234 703 aaKnown RBP18.51■□□□□ 0.55
CLIP3-206ENST00000593074 MPZL2O60487 215 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 UGT2B17O75795 530 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 ZBTB11O95625 1053 aaPredicted RBP18.51■□□□□ 0.55
CLIP3-206ENST00000593074 LGI1O95970 557 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 OSMP13725 252 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 CTSKP43235 329 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 MOGQ16653 247 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 OLIG3Q7RTU3 272 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 NLGN4XQ8N0W4 816 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 NUP43Q8NFH3 380 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 C16orf58Q96GQ5 468 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 OR7D2Q96RA2 312 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 SERINC2Q96SA4 455 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 UCK2Q9BZX2 261 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 KCMF1Q9P0J7 381 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 PHF11Q9UIL8 331 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 SH3PXD2BA1X283 911 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 LCKP06239 509 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 POLR2CP19387 275 aaPredicted RBP18.51■□□□□ 0.55
CLIP3-206ENST00000593074 C21orf33P30042 268 aaPredicted RBP18.51■□□□□ 0.55
CLIP3-206ENST00000593074 TGFBR2P37173 567 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 BUD31P41223 144 aaPredicted RBP18.51■□□□□ 0.55
CLIP3-206ENST00000593074 SUZ12Q15022 739 aaKnown RBP18.51■□□□□ 0.55
CLIP3-206ENST00000593074 FIGLAQ6QHK4 219 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 TSTD1Q8NFU3 115 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 SLC7A13Q8TCU3 470 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 TCEAL2Q9H3H9 227 aaPredicted RBP18.51■□□□□ 0.55
CLIP3-206ENST00000593074 NDOR1Q9UHB4 597 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 SLC6A14Q9UN76 642 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 KCNE3Q9Y6H6 103 aa18.51■□□□□ 0.55
CLIP3-206ENST00000593074 NINQ8N4C6 2090 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 GOLGA4Q13439 2230 aaKnown RBP18.5■□□□□ 0.55
CLIP3-206ENST00000593074 EYSQ5T1H1 3165 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 SPTY2D1-AS1A0A0U1RR47 76 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 GSAPA4D1B5 854 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 OR6C74A6NCV1 312 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 M0R129 80 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 OR10H3O60404 316 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 SLITRK5O94991 958 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 THEGLP0DJG4 465 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 NUDT1P36639 197 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 NUDT6P53370 316 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 UGT2B15P54855 530 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 MLLT10P55197 1068 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 RELAQ04206 551 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 FOXD4Q12950 439 aaPredicted RBP18.5■□□□□ 0.55
CLIP3-206ENST00000593074 EIF2B5Q13144 721 aaKnown RBP18.5■□□□□ 0.55
CLIP3-206ENST00000593074 ILKQ13418 452 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 ZNF829Q3KNS6 432 aaPredicted RBP18.5■□□□□ 0.55
CLIP3-206ENST00000593074 LEXMQ3ZCV2 418 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 TMEM236Q5W0B7 351 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 PGBD2Q6P3X8 592 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 FRMD1Q8N878 549 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 OR10G6Q8NH81 332 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 GIMAP5Q96F15 307 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 PINK1Q9BXM7 581 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 ITPAQ9BY32 194 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 AMBNQ9NP70 447 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 PRDM9Q9NQV7 894 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 POT1Q9NUX5 634 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 C2orf42Q9NWW7 574 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 GPR83Q9NYM4 423 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 NTMQ9P121 344 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 CPNE7Q9UBL6 633 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 SH3D21A4FU49 640 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 FAM221BA6H8Z2 402 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 URADA6NGE7 173 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 CNR2P34972 360 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 PIN1Q13526 163 aaPredicted RBP18.5■□□□□ 0.55
CLIP3-206ENST00000593074 LTB4RQ15722 352 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 GPAT3Q53EU6 434 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 ZNF542PQ5EBM4 170 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 SAMD14Q8IZD0 417 aaPredicted RBP18.5■□□□□ 0.55
CLIP3-206ENST00000593074 LRRC25Q8N386 305 aaPredicted RBP18.5■□□□□ 0.55
CLIP3-206ENST00000593074 BORCS5Q969J3 196 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 SLC38A1Q9H2H9 487 aa18.5■□□□□ 0.55
CLIP3-206ENST00000593074 MAN2C1Q9NTJ4 1040 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms