RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 C10orf62Q5T681 223 aaPredicted RBP9.55□□□□□ -0.88
VPS4B-207ENST00000591519 GTF2H2CQ6P1K8 395 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 RNF111Q6ZNA4 994 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 SEM1Q6ZVN7 128 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 MYLK4Q86YV6 388 aaPredicted RBP9.55□□□□□ -0.88
VPS4B-207ENST00000591519 PTGR2Q8N8N7 351 aaPredicted RBP9.55□□□□□ -0.88
VPS4B-207ENST00000591519 OR10G3Q8NGC4 313 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 NEIL3Q8TAT5 605 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 AENQ8WTP8 325 aaKnown RBP9.55□□□□□ -0.88
VPS4B-207ENST00000591519 ISL2Q96A47 359 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 SECISBP2Q96T21 854 aaKnown RBP9.55□□□□□ -0.88
VPS4B-207ENST00000591519 NTMT1Q9BV86 223 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 IPPKQ9H8X2 491 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 WDR41Q9HAD4 459 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 CXorf21Q9HAI6 301 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 SPRR3Q9UBC9 169 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 XPR1Q9UBH6 696 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 ADAM29Q9UKF5 820 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 L3MBTL1Q9Y468 752 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 ARHGAP21Q5T5U3 1957 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 FREM3P0C091 2139 aa9.55□□□□□ -0.88
VPS4B-207ENST00000591519 C2orf92A0A1B0GVN3 265 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 GLOD5A6NK44 160 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 HSPB2A8KAH6 182 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 CAPN14A8MX76 684 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 PGRMC2O15173 223 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 OR10H2O60403 315 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 SMIM24O75264 130 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 CTAG2O75638 210 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 SNX4O95219 450 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 CLDN9O95484 217 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 RBP1P09455 135 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 NR2F6P10588 404 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 KRT15P19012 456 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 CEACAM8P31997 349 aaPredicted RBP9.54□□□□□ -0.88
VPS4B-207ENST00000591519 TIMP3P35625 211 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 NEK2P51955 445 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 IFFO1Q0D2I5 559 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 HSPB2Q16082 182 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 TSNAXIP1Q2TAA8 658 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 FBXL19-AS1Q494R0 122 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 PRAMEF20Q5VT98 475 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 TMEM198Q66K66 360 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 WDR93Q6P2C0 686 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 CYP20A1Q6UW02 462 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 ARSKQ6UWY0 536 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 RPS27LQ71UM5 84 aaKnown RBP9.54□□□□□ -0.88
VPS4B-207ENST00000591519 GOLGA7Q7Z5G4 137 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 ULK2Q8IYT8 1036 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 TAGAPQ8N103 731 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 ZNF615Q8N8J6 731 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 C17orf47Q8NEP4 570 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 TRPC4APQ8TEL6 797 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.54□□□□□ -0.88
VPS4B-207ENST00000591519 UCN3Q969E3 161 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 ADIPOR1Q96A54 375 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 MTBPQ96DY7 904 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 SERPINI1Q99574 410 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 DOHHQ9BU89 302 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 ANGPTL4Q9BY76 406 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 UBQLN3Q9H347 655 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 EXO5Q9H790 373 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 ALKBH4Q9NXW9 302 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 B4GALT7Q9UBV7 327 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 RNF11Q9Y3C5 154 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 NPFFR2Q9Y5X5 522 aa9.54□□□□□ -0.88
VPS4B-207ENST00000591519 SETD2Q9BYW2 2564 aaPredicted RBP9.54□□□□□ -0.88
VPS4B-207ENST00000591519 OR7A17O14581 309 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 TP53I11O14683 189 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 AIFM1O95831 613 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 HPNP05981 417 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 COL6A2P12110 1019 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 NAGAP17050 411 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 S1PR1P21453 382 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 PIK3R1P27986 724 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 SSTR4P31391 388 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 DNAJA1P31689 397 aaKnown RBP9.53□□□□□ -0.88
VPS4B-207ENST00000591519 CASP3P42574 277 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 CRYZQ08257 329 aaKnown RBP9.53□□□□□ -0.88
VPS4B-207ENST00000591519 NHSL2Q5HYW2 709 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 FNDC7Q5VTL7 733 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 FAM219BQ5XKK7 198 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 VASNQ6EMK4 673 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 OR52E8Q6IFG1 317 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 POMZP3Q6PJE2 187 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 TIFABQ6ZNK6 161 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 NUDT13Q86X67 352 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 FAM13CQ8NE31 585 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 OR7G1Q8NGA0 311 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 OR4K14Q8NGD5 310 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 SPPL2AQ8TCT8 520 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 DOK4Q8TEW6 326 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 MZB1Q8WU39 189 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 NINJ1Q92982 152 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 NSUN5Q96P11 429 aaKnown RBP9.53□□□□□ -0.88
VPS4B-207ENST00000591519 GAL3ST4Q96RP7 486 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 TIMP4Q99727 224 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 MRPL57Q9BQC6 102 aaKnown RBP9.53□□□□□ -0.88
VPS4B-207ENST00000591519 CXXC4Q9H2H0 198 aa9.53□□□□□ -0.88
VPS4B-207ENST00000591519 SLC6A15Q9H2J7 730 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms