RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 FAM234BA2RU67 622 aa17.6■□□□□ 0.41
CLPTM1-209ENST00000588855 OR6C76A6NM76 312 aa17.6■□□□□ 0.41
CLPTM1-209ENST00000588855 UPK1AO00322 258 aa17.6■□□□□ 0.41
CLPTM1-209ENST00000588855 RNASET2O00584 256 aaKnown RBP17.6■□□□□ 0.41
CLPTM1-209ENST00000588855 PRAMEF2O60811 474 aa17.6■□□□□ 0.41
CLPTM1-209ENST00000588855 PGRP06401 933 aa17.6■□□□□ 0.41
CLPTM1-209ENST00000588855 ABCB1P08183 1280 aaPredicted RBP17.6■□□□□ 0.41
CLPTM1-209ENST00000588855 ST13P50502 369 aaKnown RBP17.6■□□□□ 0.41
CLPTM1-209ENST00000588855 POLR2JP52435 117 aaKnown RBP17.6■□□□□ 0.41
CLPTM1-209ENST00000588855 IRX1P78414 480 aaPredicted RBP17.6■□□□□ 0.41
CLPTM1-209ENST00000588855 ACER2Q5QJU3 275 aa17.6■□□□□ 0.41
CLPTM1-209ENST00000588855 ISLR2Q6UXK2 745 aa17.6■□□□□ 0.41
CLPTM1-209ENST00000588855 SLC29A4Q7RTT9 530 aa17.6■□□□□ 0.41
CLPTM1-209ENST00000588855 RPS19BP1Q86WX3 136 aaKnown RBP17.6■□□□□ 0.41
CLPTM1-209ENST00000588855 FUNDC1Q8IVP5 155 aa17.6■□□□□ 0.41
CLPTM1-209ENST00000588855 OR2L13Q8N349 312 aa17.6■□□□□ 0.41
CLPTM1-209ENST00000588855 WWTR1Q9GZV5 400 aa17.6■□□□□ 0.41
CLPTM1-209ENST00000588855 FAM120CQ9NX05 1096 aaKnown RBP17.6■□□□□ 0.41
CLPTM1-209ENST00000588855 CCDC167Q9P0B6 97 aa17.6■□□□□ 0.41
CLPTM1-209ENST00000588855 TUBD1Q9UJT1 453 aa17.6■□□□□ 0.41
CLPTM1-209ENST00000588855 ADAM21Q9UKJ8 722 aa17.6■□□□□ 0.41
CLPTM1-209ENST00000588855 CFLARO15519 480 aa17.59■□□□□ 0.41
CLPTM1-209ENST00000588855 SNX3O60493 162 aa17.59■□□□□ 0.41
CLPTM1-209ENST00000588855 SHOX2O60902 331 aaPredicted RBP17.59■□□□□ 0.41
CLPTM1-209ENST00000588855 NME6O75414 186 aaPredicted RBP17.59■□□□□ 0.41
CLPTM1-209ENST00000588855 ALPPP05187 535 aa17.59■□□□□ 0.41
CLPTM1-209ENST00000588855 CD1EP15812 388 aa17.59■□□□□ 0.41
CLPTM1-209ENST00000588855 EMDP50402 254 aa17.59■□□□□ 0.41
CLPTM1-209ENST00000588855 HBA1P69905 142 aa17.59■□□□□ 0.41
CLPTM1-209ENST00000588855 MFAP5Q13361 173 aa17.59■□□□□ 0.41
CLPTM1-209ENST00000588855 MEP1AQ16819 746 aa17.59■□□□□ 0.41
CLPTM1-209ENST00000588855 TIGD2Q4W5G0 525 aa17.59■□□□□ 0.41
CLPTM1-209ENST00000588855 AGKQ53H12 422 aa17.59■□□□□ 0.41
CLPTM1-209ENST00000588855 ANXA8L1Q5VT79 327 aa17.59■□□□□ 0.41
CLPTM1-209ENST00000588855 BEST3Q8N1M1 668 aa17.59■□□□□ 0.41
CLPTM1-209ENST00000588855 C9orf43Q8TAL5 461 aaPredicted RBP17.59■□□□□ 0.41
CLPTM1-209ENST00000588855 NUBPLQ8TB37 319 aa17.59■□□□□ 0.41
CLPTM1-209ENST00000588855 ZNF354BQ96LW1 612 aa17.59■□□□□ 0.41
CLPTM1-209ENST00000588855 OR52E6Q96RD3 313 aa17.59■□□□□ 0.41
CLPTM1-209ENST00000588855 ITPAQ9BY32 194 aa17.59■□□□□ 0.41
CLPTM1-209ENST00000588855 EPN3Q9H201 632 aa17.59■□□□□ 0.41
CLPTM1-209ENST00000588855 CXorf36Q9H7Y0 433 aa17.59■□□□□ 0.41
CLPTM1-209ENST00000588855 TEKT2Q9UIF3 430 aa17.59■□□□□ 0.41
CLPTM1-209ENST00000588855 C19orf53Q9UNZ5 99 aaPredicted RBP17.59■□□□□ 0.41
CLPTM1-209ENST00000588855 TLN1Q9Y490 2541 aaKnown RBP17.58■□□□□ 0.41
CLPTM1-209ENST00000588855 CNTRLQ7Z7A1 2325 aa17.58■□□□□ 0.41
CLPTM1-209ENST00000588855 PRSS51A0A1B0GVH4 220 aa17.58■□□□□ 0.41
CLPTM1-209ENST00000588855 WWP2O00308 870 aa17.58■□□□□ 0.41
CLPTM1-209ENST00000588855 BCAS2O75934 225 aaPredicted RBP17.58■□□□□ 0.41
CLPTM1-209ENST00000588855 PSMG1O95456 288 aa17.58■□□□□ 0.41
CLPTM1-209ENST00000588855 IL6P05231 212 aa17.58■□□□□ 0.41
CLPTM1-209ENST00000588855 IFI6P09912 130 aa17.58■□□□□ 0.41
CLPTM1-209ENST00000588855 MLF1P58340 268 aa17.58■□□□□ 0.41
CLPTM1-209ENST00000588855 LY6DQ14210 128 aa17.58■□□□□ 0.41
CLPTM1-209ENST00000588855 ABHD17BQ5VST6 288 aa17.58■□□□□ 0.41
CLPTM1-209ENST00000588855 SZRD1Q7Z422 152 aa17.58■□□□□ 0.41
CLPTM1-209ENST00000588855 LGI4Q8N135 537 aa17.58■□□□□ 0.41
CLPTM1-209ENST00000588855 ARMC10Q8N2F6 343 aa17.58■□□□□ 0.41
CLPTM1-209ENST00000588855 OR5L2Q8NGL0 311 aa17.58■□□□□ 0.41
CLPTM1-209ENST00000588855 OR4A15Q8NGL6 344 aa17.58■□□□□ 0.41
CLPTM1-209ENST00000588855 PSMA8Q8TAA3 256 aa17.58■□□□□ 0.41
CLPTM1-209ENST00000588855 VPS33AQ96AX1 596 aa17.58■□□□□ 0.41
CLPTM1-209ENST00000588855 TRIM4Q9C037 500 aa17.58■□□□□ 0.41
CLPTM1-209ENST00000588855 NEUROD4Q9HD90 331 aa17.58■□□□□ 0.41
CLPTM1-209ENST00000588855 MYOTQ9UBF9 498 aa17.58■□□□□ 0.41
CLPTM1-209ENST00000588855 ERVK-11Q9UQG0 969 aa17.58■□□□□ 0.41
CLPTM1-209ENST00000588855 SNX8Q9Y5X2 465 aa17.58■□□□□ 0.41
CLPTM1-209ENST00000588855 NR5A2O00482 541 aa17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 COQ9O75208 318 aa17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 CPSF4O95639 269 aaKnown RBP17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 F10P00742 488 aa17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 UBAP2LQ14157 1087 aaKnown RBP17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 RCAN2Q14206 197 aa17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 IGFL2Q6UWQ7 119 aa17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 GK5Q6ZS86 529 aa17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 CPSF7Q8N684 471 aaKnown RBP17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 ZNF441Q8N8Z8 693 aa17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 VPS37AQ8NEZ2 397 aa17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 FAM120BQ96EK7 910 aaKnown RBP17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 EPS8L2Q9H6S3 715 aa17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 ZNF71Q9NQZ8 489 aaPredicted RBP17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 SAR1AQ9NR31 198 aa17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 TAS2R9Q9NYW1 312 aa17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 STMN3Q9NZ72 180 aa17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 PRODH2Q9UF12 536 aa17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 BTNL2Q9UIR0 455 aa17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 CFL2Q9Y281 166 aa17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 ZNF451Q9Y4E5 1061 aa17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 HEMK1Q9Y5R4 338 aaPredicted RBP17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 C2orf92A0A1B0GVN3 265 aa17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 ZNF354AO60765 605 aaPredicted RBP17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 ITGA10O75578 1167 aa17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 OR2J2O76002 312 aa17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 SOAT1P35610 550 aa17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 PRKAG1P54619 331 aa17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 KCNK10P57789 538 aa17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 ZNF155Q12901 538 aaPredicted RBP17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 NNATQ16517 81 aa17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 LACTB2Q53H82 288 aaPredicted RBP17.57■□□□□ 0.4
CLPTM1-209ENST00000588855 BLOC1S3Q6QNY0 202 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms