RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 FAM171BQ6P995 826 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 KDELC1Q6UW63 502 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 ENPP6Q6UWR7 440 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 CEACAM20Q6UY09 585 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 DLEU7Q6UYE1 221 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 IDO2Q6ZQW0 420 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 MSANTD1Q6ZTZ1 278 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 PAGE2Q7Z2X7 111 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 LIMS2Q7Z4I7 341 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 SYVN1Q86TM6 617 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 ISCA2Q86U28 154 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 NOXA1Q86UR1 476 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 DENND1CQ8IV53 801 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 SFTPA2Q8IWL1 248 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 MICU2Q8IYU8 434 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 C1orf52Q8N6N3 182 aaKnown RBP3.93□□□□□ -1.78
LIG3-211ENST00000588713 CELF2-AS1Q8N7Q2 184 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 LSMEM1Q8N8F7 131 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 GLB1L3Q8NCI6 653 aaPredicted RBP3.93□□□□□ -1.78
LIG3-211ENST00000588713 ZNF540Q8NDQ6 660 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 IPMKQ8NFU5 416 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 OR6C4Q8NGE1 309 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 OR56A4Q8NGH8 313 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 GPR150Q8NGU9 434 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 FBXO30Q8TB52 745 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 SLC2A14Q8TDB8 520 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 ZDHHC1Q8WTX9 485 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 ANKRD49Q8WVL7 239 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 SLC13A3Q8WWT9 602 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 SLC7A6Q92536 515 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 EXT2Q93063 718 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 MYDGFQ969H8 173 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 KIAA1191Q96A73 305 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 PTERQ96BW5 349 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 RHBDF1Q96CC6 855 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 PHF21BQ96EK2 531 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 MYO19Q96H55 970 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 C8orf48Q96LL4 319 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 CEP295NLQ96MC4 621 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 ZNF599Q96NL3 588 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 OR2A14Q96R47 310 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 FAM129BQ96TA1 746 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 ZBTB18Q99592 522 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 CPPED1Q9BRF8 314 aaPredicted RBP3.93□□□□□ -1.78
LIG3-211ENST00000588713 DUSP16Q9BY84 665 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 ALOXE3Q9BYJ1 711 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 DERL2Q9GZP9 239 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 SLC22A4Q9H015 551 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 ENKD1Q9H0I2 346 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 DPEP3Q9H4B8 488 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 LIN7BQ9HAP6 207 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 SMURF2Q9HAU4 748 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 ZBTB20Q9HC78 741 aaPredicted RBP3.93□□□□□ -1.78
LIG3-211ENST00000588713 APMAPQ9HDC9 416 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 DYRK4Q9NR20 520 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 GIMAP4Q9NUV9 329 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 DCAF13Q9NV06 445 aaKnown RBP3.93□□□□□ -1.78
LIG3-211ENST00000588713 TMEM30AQ9NV96 361 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 FKBP14Q9NWM8 211 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 OSER1Q9NX31 292 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 DNAJB12Q9NXW2 375 aaKnown RBP3.93□□□□□ -1.78
LIG3-211ENST00000588713 GPR83Q9NYM4 423 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 IL37Q9NZH6 218 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 NUDT4Q9NZJ9 180 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 KIF17Q9P2E2 1029 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 LRIT1Q9P2V4 623 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 KCNN3Q9UGI6 736 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 SLC2A6Q9UGQ3 507 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 KLHL21Q9UJP4 597 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 STUB1Q9UNE7 303 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 SAMD4AQ9UPU9 718 aaKnown RBP3.93□□□□□ -1.78
LIG3-211ENST00000588713 PCDHB14Q9Y5E9 798 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 KLK4Q9Y5K2 254 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 GMPPBQ9Y5P6 360 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 PTGDR2Q9Y5Y4 395 aa3.93□□□□□ -1.78
LIG3-211ENST00000588713 HIVEP2P31629 2446 aa3.92□□□□□ -1.78
LIG3-211ENST00000588713 EDDM13A0A1B0GTR0 161 aa3.92□□□□□ -1.78
LIG3-211ENST00000588713 IQCMA0A1B0GVH7 501 aa3.92□□□□□ -1.78
LIG3-211ENST00000588713 SERTM1A2A2V5 107 aa3.92□□□□□ -1.78
LIG3-211ENST00000588713 MROH6A6NGR9 719 aa3.92□□□□□ -1.78
LIG3-211ENST00000588713 A8MVJ9 347 aa3.92□□□□□ -1.78
LIG3-211ENST00000588713 B4DGG1 531 aa3.92□□□□□ -1.78
LIG3-211ENST00000588713 B4E171 279 aa3.92□□□□□ -1.78
LIG3-211ENST00000588713 C9JVG2 144 aa3.92□□□□□ -1.78
LIG3-211ENST00000588713 PTGES3LE9PB15 166 aa3.92□□□□□ -1.78
LIG3-211ENST00000588713 FAM72CH0Y354 149 aa3.92□□□□□ -1.78
LIG3-211ENST00000588713 CLDN5O00501 218 aa3.92□□□□□ -1.78
LIG3-211ENST00000588713 CTDSP2O14595 271 aa3.92□□□□□ -1.78
LIG3-211ENST00000588713 ANKRD28O15084 1053 aa3.92□□□□□ -1.78
LIG3-211ENST00000588713 MATN3O15232 486 aa3.92□□□□□ -1.78
LIG3-211ENST00000588713 PDPK1O15530 556 aa3.92□□□□□ -1.78
LIG3-211ENST00000588713 ARHGEF9O43307 516 aa3.92□□□□□ -1.78
LIG3-211ENST00000588713 XPNPEP2O43895 674 aa3.92□□□□□ -1.78
LIG3-211ENST00000588713 TMCC2O75069 709 aa3.92□□□□□ -1.78
LIG3-211ENST00000588713 VPS26AO75436 327 aa3.92□□□□□ -1.78
LIG3-211ENST00000588713 ERN1O75460 977 aaKnown RBP3.92□□□□□ -1.78
LIG3-211ENST00000588713 CEACAM4O75871 244 aa3.92□□□□□ -1.78
LIG3-211ENST00000588713 WDR47O94967 919 aa3.92□□□□□ -1.78
LIG3-211ENST00000588713 SEMA3DO95025 777 aa3.92□□□□□ -1.78
LIG3-211ENST00000588713 IGLV3-25P01717 112 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms