RNA–Protein interactions for RNA: ENST00000585223.1

DDX5-233, Transcript of DEAD-box helicase 5, human

TSL 2

Gene DDX5, Length 699 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX5-233	ENST00000585223	ZFP28	Q8NHY6	868 aa		10.34	□□□□□ -0.75
DDX5-233	ENST00000585223	ZBED6CL	Q96FA7	236 aa	Predicted RBP	10.34	□□□□□ -0.75
DDX5-233	ENST00000585223	LMF1	Q96S06	567 aa		10.34	□□□□□ -0.75
DDX5-233	ENST00000585223	RASL10B	Q96S79	203 aa		10.34	□□□□□ -0.75
DDX5-233	ENST00000585223	CCDC28B	Q9BUN5	200 aa		10.34	□□□□□ -0.75
DDX5-233	ENST00000585223	DUSP26	Q9BV47	211 aa		10.34	□□□□□ -0.75
DDX5-233	ENST00000585223	HES7	Q9BYE0	225 aa		10.34	□□□□□ -0.75
DDX5-233	ENST00000585223	CLMP	Q9H6B4	373 aa		10.34	□□□□□ -0.75
DDX5-233	ENST00000585223	SIRT3	Q9NTG7	399 aa	Predicted RBP	10.34	□□□□□ -0.75
DDX5-233	ENST00000585223	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	10.34	□□□□□ -0.75
DDX5-233	ENST00000585223	STMN3	Q9NZ72	180 aa		10.34	□□□□□ -0.75
DDX5-233	ENST00000585223	MYOT	Q9UBF9	498 aa		10.34	□□□□□ -0.75
DDX5-233	ENST00000585223	TEKT2	Q9UIF3	430 aa		10.34	□□□□□ -0.75
DDX5-233	ENST00000585223	EXPH5	Q8NEV8	1989 aa		10.34	□□□□□ -0.75
DDX5-233	ENST00000585223		A0A1W2PRB8	838 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	DYTN	A2CJ06	578 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	OR6C76	A6NM76	312 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	UPK1A	O00322	258 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	FCHO1	O14526	889 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	PRAMEF2	O60811	474 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	OR6B1	O95007	311 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	ABCB1	P08183	1280 aa	Predicted RBP	10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	IDO1	P14902	403 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	CD1E	P15812	388 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	CD96	P40200	585 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	SOX3	P41225	446 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	EMD	P50402	254 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	SSR4	P51571	173 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	NR0B1	P51843	470 aa	Known RBP	10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	CLNS1A	P54105	237 aa	Known RBP	10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	MANF	P55145	182 aa	Known RBP	10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	OC90	Q02509	493 aa	Predicted RBP	10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	ZNF155	Q12901	538 aa	Predicted RBP	10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	KLRB1	Q12918	225 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	FAM174B	Q3ZCQ3	159 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	PRR30	Q53SZ7	412 aa	Predicted RBP	10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	PAOX	Q6QHF9	649 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	LYPD8	Q6UX82	237 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	IGFL3	Q6UXB1	125 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223		Q6ZS92	163 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	SZRD1	Q7Z422	152 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	ANKRD46	Q86W74	232 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	PRR22	Q8IZ63	422 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	ZNF843	Q8N446	348 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223		Q8NA96	180 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	MDS2	Q8NDY4	140 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	NUBPL	Q8TB37	319 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	FBXO30	Q8TB52	745 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	TM9SF4	Q92544	642 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	ADIPOR1	Q96A54	375 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	TESC	Q96BS2	214 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	ELP4	Q96EB1	424 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	OTUB1	Q96FW1	271 aa	Predicted RBP	10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	ZNF317	Q96PQ6	595 aa	Predicted RBP	10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	TRIM4	Q9C037	500 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	BHLHE41	Q9C0J9	482 aa	Predicted RBP	10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	RNF32	Q9H0A6	362 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	10.33	□□□□□ -0.76	2e-10	■□□□□ 10.5
DDX5-233	ENST00000585223	NXF5	Q9H1B4	397 aa	Known RBP	10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	CXorf36	Q9H7Y0	433 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	FOLH1B	Q9HBA9	442 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	ACSS1	Q9NUB1	689 aa	Predicted RBP	10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	ATAD3A	Q9NVI7	634 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	DDX18	Q9NVP1	670 aa	Known RBP	10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	ABI3	Q9P2A4	366 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	HEMK1	Q9Y5R4	338 aa	Predicted RBP	10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	COPG1	Q9Y678	874 aa	Known RBP	10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	ATRX	P46100	2492 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	ZFYVE26	Q68DK2	2539 aa		10.33	□□□□□ -0.76
DDX5-233	ENST00000585223	IGSF10	Q6WRI0	2623 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223		A0A087WV62	115 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	C2orf92	A0A1B0GVN3	265 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	PLOD2	O00469	737 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	PLOD3	O60568	738 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	SCN2B	O60939	215 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	PSMG1	O95456	288 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	TROVE2	P10155	538 aa	Known RBP eCLIP	10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	SOAT1	P35610	550 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	KIR3DL1	P43629	444 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	TNFSF10	P50591	281 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	HLCS	P50747	726 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	SEC24C	P53992	1094 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	CORO7	P57737	925 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	GNGT1	P63211	74 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	RPS6KA2	Q15349	733 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	OR1C1	Q15619	314 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	GSTA3	Q16772	222 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	PLEKHN1	Q494U1	663 aa	Predicted RBP	10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	HLA-DQA1	Q5Y7H0	255 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	IL20RB	Q6UXL0	311 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	NPSR1	Q6W5P4	371 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	HPS6	Q86YV9	775 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	CLEC4F	Q8N1N0	589 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	MIER2	Q8N344	545 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	OR2L13	Q8N349	312 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	TEX19	Q8NA77	164 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	OR5L2	Q8NGL0	311 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	OR5AK3P	Q8NH89	298 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	ASB15	Q8WXK1	588 aa		10.32	□□□□□ -0.76
DDX5-233	ENST00000585223	OR5P2	Q8WZ92	322 aa		10.32	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms