RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 CLIC1O00299 241 aa15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 UPK1AO00322 258 aa15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 PCDH17O14917 1159 aa15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 C1QCP02747 245 aa15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 SLC6A2P23975 617 aa15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 MC3RP41968 323 aa15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 NCALDP61601 193 aa15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 RPS18P62269 152 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 MRPS35P82673 323 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 GAB1Q13480 694 aa15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 TGIF1Q15583 401 aa15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 SFT2D3Q587I9 215 aa15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 PCSK4Q6UW60 755 aa15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 GPR155Q7Z3F1 870 aa15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 C6orf120Q7Z4R8 191 aa15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 CPEB2Q7Z5Q1 589 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 GALNT12Q8IXK2 581 aa15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 OR2L13Q8N349 312 aa15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 ZNF843Q8N446 348 aa15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 LSM14AQ8ND56 463 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 SFXN5Q8TD22 340 aa15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 MOAP1Q96BY2 351 aa15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 SLC39A3Q9BRY0 314 aa15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 SLC35A5Q9BS91 424 aa15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 TPT1P8Q9HAU6 139 aa15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 C19orf25Q9UFG5 118 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 KCND3Q9UK17 655 aa15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 C19orf53Q9UNZ5 99 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-228ENST00000583363 IGHV3-20A0A0C4DH32 117 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 HRKO00198 91 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 GYG2O15488 501 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 KRT75O95678 551 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 PLA2G2AP14555 144 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 MMP11P24347 488 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 SOAT1P35610 550 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 TLE3Q04726 772 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 FUT7Q11130 342 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 ZNF267Q14586 743 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 SPDYE7PQ495Y7 208 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 SAXO2Q658L1 398 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 SPACA3Q8IXA5 215 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 SLC15A3Q8IY34 581 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 DEFB107AQ8IZN7 70 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 NUP43Q8NFH3 380 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 OR8J3Q8NGG0 315 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 OR5AK3PQ8NH89 298 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 OR14A16Q8NHC5 309 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 DAZLQ92904 295 aaKnown RBP15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 TMEM125Q96AQ2 219 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 NACC2Q96BF6 587 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 NEURL3Q96EH8 262 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 AURKBQ96GD4 344 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 SENP5Q96HI0 755 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 MAGED4Q96JG8 741 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 SH3GL1Q99961 368 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 WDR77Q9BQA1 342 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 CPPED1Q9BRF8 314 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 MESP1Q9BRJ9 268 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 ANKRA2Q9H9E1 313 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 CMTM6Q9NX76 183 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 HS3ST3B1Q9Y662 390 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 CLCA3PQ9Y6N3 262 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 ZNF462Q96JM2 2506 aa15.24■□□□□ 0.03
CDK5RAP3-228ENST00000583363 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 RNF103-CHMP3A0A140T963 221 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 ERICH4A6NGS2 130 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 SOCS6O14544 535 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 DYRK3O43781 588 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 BCAS2O75934 225 aaPredicted RBP15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 DDAH2O95865 285 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 CBX7O95931 251 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 PPIBP23284 216 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 CHI3L1P36222 383 aaPredicted RBP15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 GPR143P51810 404 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 PGDP52209 483 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 PRKAG1P54619 331 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 PRR5P85299 388 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 SELPLGQ14242 412 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 DNAL1Q4LDG9 190 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 C6orf163Q5TEZ5 329 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 BHLHB9Q6PI77 547 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 KIRREL2Q6UWL6 708 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 ASRGL1Q7L266 308 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 VWA5B2Q8N398 1253 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 MORN4Q8NDC4 146 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 SIMC1Q8NDZ2 872 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 NFAM1Q8NET5 270 aaPredicted RBP15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 OR7G1Q8NGA0 311 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 OR56A1Q8NGH5 318 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 ZNF721Q8TF20 911 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 C8orf44Q96CB5 159 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 GIMAP5Q96F15 307 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 CDRT15Q96T59 188 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 LRMDAQ9H2I8 198 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 IKZF5Q9H5V7 419 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 ZCCHC3Q9NUD5 404 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 GPATCH2Q9NW75 528 aa15.23■□□□□ 0.03
CDK5RAP3-228ENST00000583363 TMEM181Q9P2C4 612 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms