RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 KIF2BQ8N4N8 673 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 SLC5A8Q8N695 610 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 TRIML2Q8N7C3 387 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 OR52R1Q8NGF1 315 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 OR56A1Q8NGH5 318 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 OR5L2Q8NGL0 311 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 NUBPLQ8TB37 319 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 LRRC37BQ96QE4 947 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 CXorf36Q9H7Y0 433 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 SERHLQ9NQF3 203 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 SNX8Q9Y5X2 465 aa15.88■□□□□ 0.13
NUP88-210ENST00000574867 RFXANKO14593 260 aa15.87■□□□□ 0.13
NUP88-210ENST00000574867 ANGPT2O15123 496 aa15.87■□□□□ 0.13
NUP88-210ENST00000574867 EMC8O43402 210 aa15.87■□□□□ 0.13
NUP88-210ENST00000574867 PSMG1O95456 288 aa15.87■□□□□ 0.13
NUP88-210ENST00000574867 SOAT1P35610 550 aa15.87■□□□□ 0.13
NUP88-210ENST00000574867 RNF4P78317 190 aa15.87■□□□□ 0.13
NUP88-210ENST00000574867 MYBPC3Q14896 1274 aa15.87■□□□□ 0.13
NUP88-210ENST00000574867 SPDYE7PQ495Y7 208 aa15.87■□□□□ 0.13
NUP88-210ENST00000574867 BHLHB9Q6PI77 547 aa15.87■□□□□ 0.13
NUP88-210ENST00000574867 C9orf40Q8IXQ3 194 aa15.87■□□□□ 0.13
NUP88-210ENST00000574867 LGI4Q8N135 537 aa15.87■□□□□ 0.13
NUP88-210ENST00000574867 FAM120BQ96EK7 910 aaKnown RBP15.87■□□□□ 0.13
NUP88-210ENST00000574867 MS4A4EQ96PG1 132 aa15.87■□□□□ 0.13
NUP88-210ENST00000574867 CCDC106Q9BWC9 280 aa15.87■□□□□ 0.13
NUP88-210ENST00000574867 TEKT2Q9UIF3 430 aa15.87■□□□□ 0.13
NUP88-210ENST00000574867 LEF1Q9UJU2 399 aaPredicted RBP15.87■□□□□ 0.13
NUP88-210ENST00000574867 NDUFAF1Q9Y375 327 aa15.87■□□□□ 0.13
NUP88-210ENST00000574867 BBIP1A8MTZ0 92 aa15.87■□□□□ 0.13
NUP88-210ENST00000574867 CEACAM4O75871 244 aa15.87■□□□□ 0.13
NUP88-210ENST00000574867 CPSF4O95639 269 aaKnown RBP15.87■□□□□ 0.13
NUP88-210ENST00000574867 TRPC1P48995 793 aa15.87■□□□□ 0.13
NUP88-210ENST00000574867 DUSP8Q13202 625 aa15.87■□□□□ 0.13
NUP88-210ENST00000574867 EBPQ15125 230 aaKnown RBP15.87■□□□□ 0.13
NUP88-210ENST00000574867 TBR1Q16650 682 aa15.87■□□□□ 0.13
NUP88-210ENST00000574867 C6orf10Q5SRN2 563 aa15.87■□□□□ 0.13
NUP88-210ENST00000574867 H3F3CQ6NXT2 135 aa15.87■□□□□ 0.13
NUP88-210ENST00000574867 C16orf52Q8NHV5 167 aa15.87■□□□□ 0.13
NUP88-210ENST00000574867 BRIX1Q8TDN6 353 aaKnown RBP15.87■□□□□ 0.13
NUP88-210ENST00000574867 ZCCHC3Q9NUD5 404 aaKnown RBP15.87■□□□□ 0.13
NUP88-210ENST00000574867 RYDENQ9NUL5 291 aaKnown RBP15.87■□□□□ 0.13
NUP88-210ENST00000574867 VPS4AQ9UN37 437 aa15.87■□□□□ 0.13
NUP88-210ENST00000574867 ASPDHA6ND91 283 aa15.86■□□□□ 0.13
NUP88-210ENST00000574867 CCT3P49368 545 aaKnown RBP15.86■□□□□ 0.13
NUP88-210ENST00000574867 EMDP50402 254 aa15.86■□□□□ 0.13
NUP88-210ENST00000574867 CCL11P51671 97 aa15.86■□□□□ 0.13
NUP88-210ENST00000574867 TLR1Q15399 786 aa15.86■□□□□ 0.13
NUP88-210ENST00000574867 COQ5Q5HYK3 327 aa15.86■□□□□ 0.13
NUP88-210ENST00000574867 CRB2Q5IJ48 1285 aa15.86■□□□□ 0.13
NUP88-210ENST00000574867 SZRD1Q7Z422 152 aa15.86■□□□□ 0.13
NUP88-210ENST00000574867 ARMC10Q8N2F6 343 aa15.86■□□□□ 0.13
NUP88-210ENST00000574867 C17orf47Q8NEP4 570 aa15.86■□□□□ 0.13
NUP88-210ENST00000574867 DNAJB8Q8NHS0 232 aa15.86■□□□□ 0.13
NUP88-210ENST00000574867 GTF2H4Q92759 462 aa15.86■□□□□ 0.13
NUP88-210ENST00000574867 MAGED4Q96JG8 741 aa15.86■□□□□ 0.13
NUP88-210ENST00000574867 TRIM4Q9C037 500 aa15.86■□□□□ 0.13
NUP88-210ENST00000574867 WWTR1Q9GZV5 400 aa15.86■□□□□ 0.13
NUP88-210ENST00000574867 ANKRA2Q9H9E1 313 aa15.86■□□□□ 0.13
NUP88-210ENST00000574867 GPR83Q9NYM4 423 aa15.86■□□□□ 0.13
NUP88-210ENST00000574867 HEMK1Q9Y5R4 338 aaPredicted RBP15.86■□□□□ 0.13
NUP88-210ENST00000574867 CFAP47Q6ZTR5 3102 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 DNAJB5O75953 348 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 ZCCHC18P0CG32 403 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 UQCRC2P22695 453 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 HLA-DQA1Q5Y7H0 255 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 FAM91A1Q658Y4 838 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 SLC2A7Q6PXP3 512 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 SNX32Q86XE0 403 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 NUP43Q8NFH3 380 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 RP9Q8TA86 221 aaKnown RBP15.85■□□□□ 0.13
NUP88-210ENST00000574867 PSMF1Q92530 271 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 GAL3ST4Q96RP7 486 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 INPP5KQ9BT40 448 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 MED13Q9UHV7 2174 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 DOCK10Q96BY6 2186 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 A0A096LPI6 279 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 RNF103-CHMP3A0A140T963 221 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 C2orf92A0A1B0GVN3 265 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 TTC36A6NLP5 189 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 ERN1O75460 977 aaKnown RBP15.85■□□□□ 0.13
NUP88-210ENST00000574867 ANP32DO95626 131 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 ALPPP05187 535 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 DCAF7P61962 342 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 ZNF155Q12901 538 aaPredicted RBP15.85■□□□□ 0.13
NUP88-210ENST00000574867 STX5Q13190 355 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 GAB1Q13480 694 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 CYLC2Q14093 348 aaPredicted RBP15.85■□□□□ 0.13
NUP88-210ENST00000574867 AGAP7PQ5VUJ5 663 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 DNAJC14Q6Y2X3 702 aaPredicted RBP15.85■□□□□ 0.13
NUP88-210ENST00000574867 SIRT6Q8N6T7 355 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 AMER2Q8N7J2 671 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 SIMC1Q8NDZ2 872 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 CRELD1Q96HD1 420 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 ZNF354BQ96LW1 612 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 AGAP4Q96P64 663 aa15.85■□□□□ 0.13
NUP88-210ENST00000574867 PCDHGA9Q9Y5G4 932 aaKnown RBP15.85■□□□□ 0.13
NUP88-210ENST00000574867 A6NL46 340 aa15.84■□□□□ 0.13
NUP88-210ENST00000574867 A8MUI8 341 aa15.84■□□□□ 0.13
NUP88-210ENST00000574867 PRKNO60260 465 aaPredicted RBP15.84■□□□□ 0.13
NUP88-210ENST00000574867 KCNH1O95259 989 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms