RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 GOLGA8QA0A0J9YX86 632 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 GOLGA8OA6NCC3 632 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 OR6C76A6NM76 312 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 MYO1GB0I1T2 1018 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 GOLGA8NF8WBI6 632 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 PDPK1O15530 556 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 PRAMEF2O60811 474 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 OR6B1O95007 311 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 PRPS2P11908 318 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 EPHA3P29320 983 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 TRHRP34981 398 aaPredicted RBP14.63□□□□□ -0.07
CHD3-215ENST00000572750 SOX3P41225 446 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 MC3RP41968 323 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 CYB561P49447 251 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 HLCSP50747 726 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 DIO3P55073 304 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 EMX2Q04743 252 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 MAP4K2Q12851 820 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 MAD2L1Q13257 205 aaPredicted RBP14.63□□□□□ -0.07
CHD3-215ENST00000572750 NNATQ16517 81 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 MPEG1Q2M385 716 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 TRMT12Q53H54 448 aaKnown RBP14.63□□□□□ -0.07
CHD3-215ENST00000572750 ZNF766Q5HY98 468 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 TMEM107Q6UX40 140 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 ZNF227Q86WZ6 799 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 CYP4Z2PQ8N1L4 340 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 FAM26EQ8N5C1 309 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 TMEM156Q8N614 296 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 OR52R1Q8NGF1 315 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 C16orf52Q8NHV5 167 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 PIWIL2Q8TC59 973 aaKnown RBP14.63□□□□□ -0.07
CHD3-215ENST00000572750 ZNF675Q8TD23 568 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 ASB15Q8WXK1 588 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 CTHRC1Q96CG8 243 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 ZNF764Q96H86 408 aaPredicted RBP14.63□□□□□ -0.07
CHD3-215ENST00000572750 C7orf26Q96N11 449 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 AMDHD1Q96NU7 426 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 GLIPR2Q9H4G4 154 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 WDR55Q9H6Y2 383 aaPredicted RBP14.63□□□□□ -0.07
CHD3-215ENST00000572750 ASIC5Q9NY37 505 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 TAS2R7Q9NYW3 318 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 SH3BP4Q9P0V3 963 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 MAP10Q9P2G4 905 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 BCAP29Q9UHQ4 241 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 ZNF639Q9UID6 485 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 NTNG1Q9Y2I2 539 aa14.63□□□□□ -0.07
CHD3-215ENST00000572750 YARS2Q9Y2Z4 477 aaKnown RBP14.63□□□□□ -0.07
CHD3-215ENST00000572750 TRPC5OSA6NMA1 111 aa14.62□□□□□ -0.07
CHD3-215ENST00000572750 VPS4BO75351 444 aa14.62□□□□□ -0.07
CHD3-215ENST00000572750 NME6O75414 186 aaPredicted RBP14.62□□□□□ -0.07
CHD3-215ENST00000572750 SLC25A12O75746 678 aa14.62□□□□□ -0.07
CHD3-215ENST00000572750 EFNA1P20827 205 aaPredicted RBP14.62□□□□□ -0.07
CHD3-215ENST00000572750 GPX3P22352 226 aa14.62□□□□□ -0.07
CHD3-215ENST00000572750 MPIP34949 423 aa14.62□□□□□ -0.07
CHD3-215ENST00000572750 PMP22Q01453 160 aa14.62□□□□□ -0.07
CHD3-215ENST00000572750 HSPB3Q12988 150 aa14.62□□□□□ -0.07
CHD3-215ENST00000572750 FAM47EQ6ZV65 393 aa14.62□□□□□ -0.07
CHD3-215ENST00000572750 LARP4Q71RC2 724 aaKnown RBP eCLIP14.62□□□□□ -0.07
CHD3-215ENST00000572750 CISD2Q8N5K1 135 aaKnown RBP14.62□□□□□ -0.07
CHD3-215ENST00000572750 OR7G2Q8NG99 324 aa14.62□□□□□ -0.07
CHD3-215ENST00000572750 OR7G1Q8NGA0 311 aa14.62□□□□□ -0.07
CHD3-215ENST00000572750 OR7A2PQ8NGA2 310 aa14.62□□□□□ -0.07
CHD3-215ENST00000572750 CPT1CQ8TCG5 803 aa14.62□□□□□ -0.07
CHD3-215ENST00000572750 C5orf34Q96MH7 638 aa14.62□□□□□ -0.07
CHD3-215ENST00000572750 ITPAQ9BY32 194 aa14.62□□□□□ -0.07
CHD3-215ENST00000572750 SHANK1Q9Y566 2161 aa14.62□□□□□ -0.07
CHD3-215ENST00000572750 C2orf92A0A1B0GVN3 265 aa14.61□□□□□ -0.07
CHD3-215ENST00000572750 A8MVJ9 347 aa14.61□□□□□ -0.07
CHD3-215ENST00000572750 SLCO1B7G3V0H7 640 aa14.61□□□□□ -0.07
CHD3-215ENST00000572750 TBX19O60806 448 aa14.61□□□□□ -0.07
CHD3-215ENST00000572750 NADKO95544 446 aaPredicted RBP14.61□□□□□ -0.07
CHD3-215ENST00000572750 ALDOCP09972 364 aaKnown RBP14.61□□□□□ -0.07
CHD3-215ENST00000572750 CD46P15529 392 aa14.61□□□□□ -0.07
CHD3-215ENST00000572750 LBPP18428 481 aa14.61□□□□□ -0.07
CHD3-215ENST00000572750 INPP5JQ15735 1006 aaPredicted RBP14.61□□□□□ -0.07
CHD3-215ENST00000572750 SMU1Q2TAY7 513 aa14.61□□□□□ -0.07
CHD3-215ENST00000572750 SLC9B1Q4ZJI4 515 aa14.61□□□□□ -0.07
CHD3-215ENST00000572750 HSP90B2PQ58FF3 399 aa14.61□□□□□ -0.07
CHD3-215ENST00000572750 FHL5Q5TD97 284 aa14.61□□□□□ -0.07
CHD3-215ENST00000572750 ZNF551Q7Z340 670 aaPredicted RBP14.61□□□□□ -0.07
CHD3-215ENST00000572750 R3HCC1LQ7Z5L2 792 aaKnown RBP14.61□□□□□ -0.07
CHD3-215ENST00000572750 ZNF441Q8N8Z8 693 aa14.61□□□□□ -0.07
CHD3-215ENST00000572750 SLC22A8Q8TCC7 542 aa14.61□□□□□ -0.07
CHD3-215ENST00000572750 CKAP2Q8WWK9 683 aa14.61□□□□□ -0.07
CHD3-215ENST00000572750 SNRNP40Q96DI7 357 aaKnown RBP14.61□□□□□ -0.07
CHD3-215ENST00000572750 MTERF3Q96E29 417 aa14.61□□□□□ -0.07
CHD3-215ENST00000572750 MAGEB18Q96M61 343 aa14.61□□□□□ -0.07
CHD3-215ENST00000572750 TRIM45Q9H8W5 580 aaPredicted RBP14.61□□□□□ -0.07
CHD3-215ENST00000572750 HPF1Q9NWY4 346 aa14.61□□□□□ -0.07
CHD3-215ENST00000572750 ERVK-11Q9UQG0 969 aa14.61□□□□□ -0.07
CHD3-215ENST00000572750 ADGRG4Q8IZF6 3080 aa14.61□□□□□ -0.07
CHD3-215ENST00000572750 ZNF195O14628 629 aa14.6□□□□□ -0.07
CHD3-215ENST00000572750 DIAPH2O60879 1101 aa14.6□□□□□ -0.07
CHD3-215ENST00000572750 LAMP1P11279 417 aa14.6□□□□□ -0.07
CHD3-215ENST00000572750 RPL3P39023 403 aaKnown RBP14.6□□□□□ -0.07
CHD3-215ENST00000572750 EMDP50402 254 aa14.6□□□□□ -0.07
CHD3-215ENST00000572750 NR0B1P51843 470 aaKnown RBP14.6□□□□□ -0.07
CHD3-215ENST00000572750 HLA-DQA1Q5Y7H0 255 aa14.6□□□□□ -0.07
CHD3-215ENST00000572750 NXNQ6DKJ4 435 aa14.6□□□□□ -0.07
CHD3-215ENST00000572750 OGFOD2Q6N063 350 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms