RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 ABT1Q9ULW3 272 aaKnown RBP16.49■□□□□ 0.23
SCARF1-205ENST00000571272 MYO7AQ13402 2215 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 CCL16O15467 120 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 NTN1O95631 604 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 SOD1P00441 154 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 NNMTP40261 264 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 MAP2K3P46734 347 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 GAS1P54826 345 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 MLLT1Q03111 559 aaPredicted RBP16.49■□□□□ 0.23
SCARF1-205ENST00000571272 KLHL22Q53GT1 634 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 RAET1GQ6H3X3 334 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 FAM129CQ86XR2 697 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 KIF18BQ86Y91 864 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 ZNF547Q8IVP9 402 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 KRT78Q8N1N4 520 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 AMER3Q8N944 861 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 IL17RCQ8NAC3 791 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 TCEAL4Q96EI5 215 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 ZBED6CLQ96FA7 236 aaPredicted RBP16.49■□□□□ 0.23
SCARF1-205ENST00000571272 HDHD5Q9BXW7 423 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 NFKBIL1Q9UBC1 381 aaPredicted RBP16.49■□□□□ 0.23
SCARF1-205ENST00000571272 ALG5Q9Y673 324 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 A0A1W2PRQ8 180 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 ERVH48-1M5A8F1 160 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 SEC14L5O43304 696 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 ALDH1A1P00352 501 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 CHRNB1P11230 501 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 BSGP35613 385 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 BUD31P41223 144 aaPredicted RBP16.48■□□□□ 0.23
SCARF1-205ENST00000571272 SNRPD2P62316 118 aaKnown RBP16.48■□□□□ 0.23
SCARF1-205ENST00000571272 CHRNEQ04844 493 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 IL18Q14116 193 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 C11orf96Q7Z7L8 435 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 CD99L2Q8TCZ2 262 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 AP3S1Q92572 193 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 UFD1Q92890 307 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 MRGPRX3Q96LB0 322 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 RIPOR3Q96MK2 946 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 TMED9Q9BVK6 235 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 QRSL1Q9H0R6 528 aaKnown RBP16.48■□□□□ 0.23
SCARF1-205ENST00000571272 IRF2BPLQ9H1B7 796 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 TBC1D17Q9HA65 648 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 ACOXLQ9NUZ1 547 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 GSTK1Q9Y2Q3 226 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 MTCL1Q9Y4B5 1905 aaKnown RBP16.48■□□□□ 0.23
SCARF1-205ENST00000571272 SMLR1H3BR10 107 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 TMPRSS11DO60235 418 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 LALBAP00709 142 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 C8AP07357 584 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 ALPPL2P10696 532 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 PCBP4P57723 403 aaKnown RBP16.48■□□□□ 0.23
SCARF1-205ENST00000571272 GNG2P59768 71 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 GPLD1P80108 840 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 C3orf38Q5JPI3 329 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 QSOX2Q6ZRP7 698 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 FAM83HQ6ZRV2 1179 aaPredicted RBP16.48■□□□□ 0.23
SCARF1-205ENST00000571272 ZDHHC5Q9C0B5 715 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 HMX1Q9NP08 348 aaPredicted RBP16.48■□□□□ 0.23
SCARF1-205ENST00000571272 B3GAT2Q9NPZ5 323 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 GIMAP4Q9NUV9 329 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 PCYT1BQ9Y5K3 369 aaPredicted RBP16.48■□□□□ 0.23
SCARF1-205ENST00000571272 DENND4CQ5VZ89 1909 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 MYO10Q9HD67 2058 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 CXorf51AA0A1B0GTR3 108 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 TNFRSF10AO00220 468 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 PPM1DO15297 605 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 CH25HO95992 272 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 ALAS2P22557 587 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 PSMB5P28074 263 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 HTR2BP41595 481 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 MTNR1AP48039 350 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 SMSP52788 366 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 CDK5Q00535 292 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 ALDH6A1Q02252 535 aaKnown RBP16.48■□□□□ 0.23
SCARF1-205ENST00000571272 FAPQ12884 760 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 COX10Q12887 443 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 GFM1Q96RP9 751 aaKnown RBP16.48■□□□□ 0.23
SCARF1-205ENST00000571272 TMEM39AQ9NV64 488 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 P2RX2Q9UBL9 471 aa16.48■□□□□ 0.23
SCARF1-205ENST00000571272 EPPINO95925 133 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 SERPIND1P05546 499 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 ACP2P11117 423 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 CPN2P22792 545 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 GPR1P46091 355 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 RAB25P57735 213 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 TPBGQ13641 420 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 GRPEL2Q8TAA5 225 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 RASSF5Q8WWW0 418 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 DTD2Q96FN9 168 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 CITED4Q96RK1 184 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 SAP130Q9H0E3 1048 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 SPHK2Q9NRA0 654 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 FAM240BA0A1B0GVZ2 78 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 GLOD5A6NK44 160 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 H7BY64 318 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 STK25O00506 426 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 PRODHO43272 600 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 AKR7A2O43488 359 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 FRS3O43559 492 aa16.47■□□□□ 0.23
SCARF1-205ENST00000571272 PRKRAO75569 313 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms