RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 VCXQ9H320 206 aa10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 NTMQ9P121 344 aa10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 PCDHGB5Q9Y5G0 923 aa10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 PLOD2O00469 737 aa10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 NR2F1P10589 423 aa10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 CKMT1AP12532 417 aa10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 DAB2P98082 770 aa10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 GK3PQ14409 553 aa10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 LGI4Q8N135 537 aa10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 CCDC74BQ96LY2 380 aa10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 BTBD9Q96Q07 612 aa10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 ADAP2Q9NPF8 381 aa10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 HRKO00198 91 aa10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 GNGT2O14610 69 aa10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 ITGA1P56199 1179 aa10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 SKP1P63208 163 aa10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 SQSTM1Q13501 440 aa10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 C1orf189Q5VU69 101 aa10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 ARHGAP22Q7Z5H3 698 aa10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 COMTD1Q86VU5 262 aa10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 KMT5CQ86Y97 462 aa10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 GPR32P1Q8NGA4 272 aa10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 ATOH1Q92858 354 aaPredicted RBP10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 NAT6Q93015 286 aa10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 QRSL1Q9H0R6 528 aaKnown RBP10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 C11orf16Q9NQ32 467 aa10.23□□□□□ -0.77
PDXDC1-216ENST00000569715 LNP1A1A4G5 178 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 H0YIG0 161 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 CD247P20963 164 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 DUSP8Q13202 625 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 PATL1Q86TB9 770 aaKnown RBP10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 OR4D9Q8NGE8 314 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 MAGEE2Q8TD90 523 aaPredicted RBP10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 SLC35A4Q96G79 324 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 COL21A1Q96P44 957 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 ACTRT3Q9BYD9 372 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 PRTFDC1Q9NRG1 225 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 PTGFRNQ9P2B2 879 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 C19orf53Q9UNZ5 99 aaPredicted RBP10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 MFN2O95140 757 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 ZIC2O95409 532 aaPredicted RBP10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 FUT4P22083 530 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 PRKACGP22612 351 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 DCTP40126 519 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 YAP1P46937 504 aaKnown RBP10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 NUP210LQ5VU65 1888 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 STK32CQ86UX6 486 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 SLC30A8Q8IWU4 369 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 GPR135Q8IZ08 494 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 SLC9A6Q92581 669 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 CDS1Q92903 461 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 WFDC6Q9BQY6 131 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 ENAMQ9NRM1 1142 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 PDP2Q9P2J9 529 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 SH3GLB1Q9Y371 365 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 OR10H2O60403 315 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 TIAF1O95411 115 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 H6PDO95479 791 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 MSL3P1P0C860 447 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 SLC35E2P0CK97 266 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 ACP2P11117 423 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 EFNA3P52797 238 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 EMP3P54852 163 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 FAM214AQ32MH5 1076 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 IFI44LQ53G44 452 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 OR2T5Q6IEZ7 315 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 ISLR2Q6UXK2 745 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 ZNF595Q8IYB9 648 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 OR2T29Q8NH02 315 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 CTHRC1Q96CG8 243 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 YIPF2Q9BWQ6 316 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 SOX17Q9H6I2 414 aaPredicted RBP10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 SMURF2Q9HAU4 748 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 NECTIN3Q9NQS3 549 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 LANCL2Q9NS86 450 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 NDUFAF4Q9P032 175 aa10.22□□□□□ -0.77
PDXDC1-216ENST00000569715 J3KTA2 159 aa10.21□□□□□ -0.77
PDXDC1-216ENST00000569715 CTNSO60931 367 aa10.21□□□□□ -0.77
PDXDC1-216ENST00000569715 CBX7O95931 251 aa10.21□□□□□ -0.77
PDXDC1-216ENST00000569715 STX4Q12846 297 aa10.21□□□□□ -0.77
PDXDC1-216ENST00000569715 PUM1Q14671 1186 aaKnown RBP eCLIP10.21□□□□□ -0.77
PDXDC1-216ENST00000569715 DUSP5Q16690 384 aa10.21□□□□□ -0.77
PDXDC1-216ENST00000569715 GPAT3Q53EU6 434 aa10.21□□□□□ -0.77
PDXDC1-216ENST00000569715 NHSL2Q5HYW2 709 aa10.21□□□□□ -0.77
PDXDC1-216ENST00000569715 NIPAL1Q6NVV3 410 aa10.21□□□□□ -0.77
PDXDC1-216ENST00000569715 PACRGLQ8N7B6 248 aa10.21□□□□□ -0.77
PDXDC1-216ENST00000569715 ZNF675Q8TD23 568 aa10.21□□□□□ -0.77
PDXDC1-216ENST00000569715 APOBEC4Q8WW27 367 aaKnown RBP10.21□□□□□ -0.77
PDXDC1-216ENST00000569715 POP5Q969H6 163 aaKnown RBP10.21□□□□□ -0.77
PDXDC1-216ENST00000569715 NDC1Q9BTX1 674 aa10.21□□□□□ -0.77
PDXDC1-216ENST00000569715 ALOXE3Q9BYJ1 711 aa10.21□□□□□ -0.77
PDXDC1-216ENST00000569715 MRPS33Q9Y291 106 aaKnown RBP10.21□□□□□ -0.77
PDXDC1-216ENST00000569715 PADI2Q9Y2J8 665 aa10.21□□□□□ -0.77
PDXDC1-216ENST00000569715 G3V2T6 193 aa10.21□□□□□ -0.77
PDXDC1-216ENST00000569715 TOX3O15405 576 aaPredicted RBP10.21□□□□□ -0.77
PDXDC1-216ENST00000569715 GDF9O60383 454 aa10.21□□□□□ -0.77
PDXDC1-216ENST00000569715 PLOD3O60568 738 aa10.21□□□□□ -0.77
PDXDC1-216ENST00000569715 E2F6O75461 281 aa10.21□□□□□ -0.77
PDXDC1-216ENST00000569715 ANKRD34CP0C6C1 535 aa10.21□□□□□ -0.77
PDXDC1-216ENST00000569715 ARSFP54793 590 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms