RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 SLC9A6Q92581 669 aa20.35■□□□□ 0.85
DENND4A-208ENST00000568515 UPRTQ96BW1 309 aa20.35■□□□□ 0.85
DENND4A-208ENST00000568515 CITED4Q96RK1 184 aa20.35■□□□□ 0.85
DENND4A-208ENST00000568515 ATF6BQ99941 703 aa20.35■□□□□ 0.85
DENND4A-208ENST00000568515 ZNF717Q9BY31 904 aaPredicted RBP20.35■□□□□ 0.85
DENND4A-208ENST00000568515 TRIM45Q9H8W5 580 aaPredicted RBP20.35■□□□□ 0.85
DENND4A-208ENST00000568515 EXOSC1Q9Y3B2 195 aaKnown RBP20.35■□□□□ 0.85
DENND4A-208ENST00000568515 GPSM3Q9Y4H4 160 aa20.35■□□□□ 0.85
DENND4A-208ENST00000568515 MTCL1Q9Y4B5 1905 aaKnown RBP20.35■□□□□ 0.85
DENND4A-208ENST00000568515 AKR7A2O43488 359 aa20.35■□□□□ 0.85
DENND4A-208ENST00000568515 OR12D1P0DN82 309 aa20.35■□□□□ 0.85
DENND4A-208ENST00000568515 CD79BP40259 229 aa20.35■□□□□ 0.85
DENND4A-208ENST00000568515 MTNR1AP48039 350 aa20.35■□□□□ 0.85
DENND4A-208ENST00000568515 PCBP4P57723 403 aaKnown RBP20.35■□□□□ 0.85
DENND4A-208ENST00000568515 KIF18BQ86Y91 864 aa20.35■□□□□ 0.85
DENND4A-208ENST00000568515 KRT78Q8N1N4 520 aa20.35■□□□□ 0.85
DENND4A-208ENST00000568515 C2orf73Q8N5S3 287 aaPredicted RBP20.35■□□□□ 0.85
DENND4A-208ENST00000568515 MORN4Q8NDC4 146 aa20.35■□□□□ 0.85
DENND4A-208ENST00000568515 ANGPTL6Q8NI99 470 aa20.35■□□□□ 0.85
DENND4A-208ENST00000568515 SETD7Q8WTS6 366 aaKnown RBP20.35■□□□□ 0.85
DENND4A-208ENST00000568515 MED30Q96HR3 178 aa20.35■□□□□ 0.85
DENND4A-208ENST00000568515 TMEM43Q9BTV4 400 aa20.35■□□□□ 0.85
DENND4A-208ENST00000568515 PLA2G12AQ9BZM1 189 aa20.35■□□□□ 0.85
DENND4A-208ENST00000568515 EPHX3Q9H6B9 360 aa20.35■□□□□ 0.85
DENND4A-208ENST00000568515 DENND4CQ5VZ89 1909 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 SNTNA6NMZ2 147 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 PI15O43692 258 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 TBX6O95947 436 aaPredicted RBP20.34■□□□□ 0.85
DENND4A-208ENST00000568515 ELFN1P0C7U0 828 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 LIMS3P0CW19 117 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 LIMS4P0CW20 117 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 CCT3P49368 545 aaKnown RBP20.34■□□□□ 0.85
DENND4A-208ENST00000568515 BTBD16Q32M84 506 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 LIPIQ6XZB0 460 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 SHFQ7M4L6 423 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 TRMT11Q7Z4G4 463 aaKnown RBP20.34■□□□□ 0.85
DENND4A-208ENST00000568515 ADIPOR2Q86V24 386 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 ZNF557Q8N988 423 aaPredicted RBP20.34■□□□□ 0.85
DENND4A-208ENST00000568515 SCLYQ96I15 445 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 F2RL3Q96RI0 385 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 MARVELD1Q9BSK0 173 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 EGLN3Q9H6Z9 239 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 P2RX2Q9UBL9 471 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 GPR52Q9Y2T5 361 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 CKAP5Q14008 2032 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 A0A1W2PRU2 124 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 TSPAN11A1L157 253 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 OR2B3O76000 313 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 CTSLP07711 333 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 NFE2L1Q14494 772 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 MINDY4Q4G0A6 757 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 PRAMEF14Q5SWL7 426 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 PRAMEF13Q5VWM6 474 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.34■□□□□ 0.858e-7■■□□□ 12.5
DENND4A-208ENST00000568515 FAM129CQ86XR2 697 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 TP53I13Q8NBR0 393 aaPredicted RBP20.34■□□□□ 0.85
DENND4A-208ENST00000568515 XAGE5Q8WWM1 108 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 EXOSC8Q96B26 276 aaKnown RBP20.34■□□□□ 0.85
DENND4A-208ENST00000568515 IL17FQ96PD4 163 aa20.34■□□□□ 0.85
DENND4A-208ENST00000568515 SOD1P00441 154 aa20.33■□□□□ 0.85
DENND4A-208ENST00000568515 RB1P06400 928 aa20.33■□□□□ 0.85
DENND4A-208ENST00000568515 PTBP1P26599 531 aaKnown RBP eCLIP20.33■□□□□ 0.852e-7■■□□□ 13.9
DENND4A-208ENST00000568515 ABATP80404 500 aa20.33■□□□□ 0.85
DENND4A-208ENST00000568515 CEP78Q5JTW2 689 aa20.33■□□□□ 0.85
DENND4A-208ENST00000568515 KHDRBS2Q5VWX1 349 aaKnown RBP20.33■□□□□ 0.85
DENND4A-208ENST00000568515 TRAPPC5Q8IUR0 188 aa20.33■□□□□ 0.85
DENND4A-208ENST00000568515 TRAF4Q9BUZ4 470 aaPredicted RBP20.33■□□□□ 0.85
DENND4A-208ENST00000568515 GTPBP2Q9BX10 602 aaKnown RBP20.33■□□□□ 0.85
DENND4A-208ENST00000568515 SLC46A2Q9BY10 475 aa20.33■□□□□ 0.85
DENND4A-208ENST00000568515 SAP130Q9H0E3 1048 aa20.33■□□□□ 0.85
DENND4A-208ENST00000568515 TMEM39AQ9NV64 488 aa20.33■□□□□ 0.85
DENND4A-208ENST00000568515 LILRB5O75023 590 aa20.33■□□□□ 0.84
DENND4A-208ENST00000568515 SLC43A1O75387 559 aa20.33■□□□□ 0.84
DENND4A-208ENST00000568515 NCR1O76036 304 aa20.33■□□□□ 0.84
DENND4A-208ENST00000568515 NR2F1P10589 423 aa20.33■□□□□ 0.84
DENND4A-208ENST00000568515 GSTM3P21266 225 aa20.33■□□□□ 0.84
DENND4A-208ENST00000568515 BSGP35613 385 aa20.33■□□□□ 0.84
DENND4A-208ENST00000568515 SOX18P35713 384 aa20.33■□□□□ 0.84
DENND4A-208ENST00000568515 FRKP42685 505 aaPredicted RBP20.33■□□□□ 0.84
DENND4A-208ENST00000568515 RRAS2P62070 204 aaPredicted RBP20.33■□□□□ 0.84
DENND4A-208ENST00000568515 SNRPD2P62316 118 aaKnown RBP20.33■□□□□ 0.84
DENND4A-208ENST00000568515 SF3A2Q15428 464 aaKnown RBP20.33■□□□□ 0.84
DENND4A-208ENST00000568515 RFPL4BQ6ZWI9 263 aa20.33■□□□□ 0.84
DENND4A-208ENST00000568515 LHFPL3Q86UP9 236 aa20.33■□□□□ 0.84
DENND4A-208ENST00000568515 MEX3DQ86XN8 651 aaKnown RBP20.33■□□□□ 0.84
DENND4A-208ENST00000568515 TMC8Q8IU68 726 aa20.33■□□□□ 0.84
DENND4A-208ENST00000568515 ZNF485Q8NCK3 441 aa20.33■□□□□ 0.84
DENND4A-208ENST00000568515 ANKK1Q8NFD2 765 aa20.33■□□□□ 0.84
DENND4A-208ENST00000568515 OR6T1Q8NGN1 323 aa20.33■□□□□ 0.84
DENND4A-208ENST00000568515 SENP5Q96HI0 755 aaPredicted RBP20.33■□□□□ 0.84
DENND4A-208ENST00000568515 QRFPRQ96P65 431 aa20.33■□□□□ 0.84
DENND4A-208ENST00000568515 DCLRE1CQ96SD1 692 aaKnown RBP20.33■□□□□ 0.84
DENND4A-208ENST00000568515 KCNJ15Q99712 375 aa20.33■□□□□ 0.84
DENND4A-208ENST00000568515 ACAT2Q9BWD1 397 aa20.33■□□□□ 0.84
DENND4A-208ENST00000568515 OR51I1Q9H343 314 aa20.33■□□□□ 0.84
DENND4A-208ENST00000568515 MTG2Q9H4K7 406 aa20.33■□□□□ 0.84
DENND4A-208ENST00000568515 MCUBQ9NWR8 336 aa20.33■□□□□ 0.84
DENND4A-208ENST00000568515 SLC9A8Q9Y2E8 581 aa20.33■□□□□ 0.84
DENND4A-208ENST00000568515 ORC5O43913 435 aa20.32■□□□□ 0.84
DENND4A-208ENST00000568515 CRYZL1O95825 349 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms