RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 ACSL3O95573 720 aa25.34■■□□□ 1.65
UBFD1-206ENST00000566669 RPS17P08708 135 aaKnown RBP25.34■■□□□ 1.65
UBFD1-206ENST00000566669 RHOXF2BP0C7M4 288 aa25.34■■□□□ 1.65
UBFD1-206ENST00000566669 HSD3B1P14060 373 aa25.34■■□□□ 1.65
UBFD1-206ENST00000566669 HSD3B2P26439 372 aa25.34■■□□□ 1.65
UBFD1-206ENST00000566669 ABCD3P28288 659 aa25.34■■□□□ 1.65
UBFD1-206ENST00000566669 CEACAM8P31997 349 aaPredicted RBP25.34■■□□□ 1.65
UBFD1-206ENST00000566669 TRPC1P48995 793 aa25.34■■□□□ 1.65
UBFD1-206ENST00000566669 DLX5P56178 289 aa25.34■■□□□ 1.65
UBFD1-206ENST00000566669 VASNQ6EMK4 673 aa25.34■■□□□ 1.65
UBFD1-206ENST00000566669 SLC30A6Q6NXT4 461 aa25.34■■□□□ 1.65
UBFD1-206ENST00000566669 NUP54Q7Z3B4 507 aa25.34■■□□□ 1.65
UBFD1-206ENST00000566669 LCA5Q86VQ0 697 aa25.34■■□□□ 1.65
UBFD1-206ENST00000566669 OR4F6Q8NGB9 312 aa25.34■■□□□ 1.65
UBFD1-206ENST00000566669 FMO2Q99518 471 aa25.34■■□□□ 1.65
UBFD1-206ENST00000566669 CDC42EP4Q9H3Q1 356 aaKnown RBP25.34■■□□□ 1.65
UBFD1-206ENST00000566669 PRODH2Q9UF12 536 aa25.34■■□□□ 1.65
UBFD1-206ENST00000566669 PPM1BO75688 479 aa25.33■■□□□ 1.65
UBFD1-206ENST00000566669 GPX3P22352 226 aa25.33■■□□□ 1.65
UBFD1-206ENST00000566669 NSUN5P2Q63ZY6 315 aa25.33■■□□□ 1.65
UBFD1-206ENST00000566669 SAMD14Q8IZD0 417 aaPredicted RBP25.33■■□□□ 1.65
UBFD1-206ENST00000566669 MNS1Q8NEH6 495 aa25.33■■□□□ 1.65
UBFD1-206ENST00000566669 SELENOMQ8WWX9 145 aa25.33■■□□□ 1.65
UBFD1-206ENST00000566669 ZNF358Q9NW07 568 aa25.33■■□□□ 1.65
UBFD1-206ENST00000566669 DNAJB12Q9NXW2 375 aaKnown RBP25.33■■□□□ 1.65
UBFD1-206ENST00000566669 CES1P1Q9UKY3 287 aa25.33■■□□□ 1.65
UBFD1-206ENST00000566669 CTAG2O75638 210 aa25.32■■□□□ 1.64
UBFD1-206ENST00000566669 CT62P0C5K7 136 aa25.32■■□□□ 1.64
UBFD1-206ENST00000566669 PRICKLE4Q2TBC4 344 aa25.32■■□□□ 1.64
UBFD1-206ENST00000566669 GLE1Q53GS7 698 aaKnown RBP25.32■■□□□ 1.64
UBFD1-206ENST00000566669 TIGD3Q6B0B8 471 aa25.32■■□□□ 1.64
UBFD1-206ENST00000566669 MMGT1Q8N4V1 131 aa25.32■■□□□ 1.64
UBFD1-206ENST00000566669 OR1J4Q8NGS1 313 aa25.32■■□□□ 1.64
UBFD1-206ENST00000566669 ZNF483Q8TF39 744 aaPredicted RBP25.32■■□□□ 1.64
UBFD1-206ENST00000566669 FAM222BQ8WU58 562 aa25.32■■□□□ 1.64
UBFD1-206ENST00000566669 RNASE6Q93091 150 aaKnown RBP25.32■■□□□ 1.64
UBFD1-206ENST00000566669 ERP27Q96DN0 273 aa25.32■■□□□ 1.64
UBFD1-206ENST00000566669 NSUN5Q96P11 429 aaKnown RBP25.32■■□□□ 1.64
UBFD1-206ENST00000566669 METTL7AQ9H8H3 244 aa25.32■■□□□ 1.64
UBFD1-206ENST00000566669 TRPS1Q9UHF7 1281 aa25.32■■□□□ 1.64
UBFD1-206ENST00000566669 NFU1Q9UMS0 254 aa25.32■■□□□ 1.64
UBFD1-206ENST00000566669 ZNF780BQ9Y6R6 833 aa25.32■■□□□ 1.64
UBFD1-206ENST00000566669 CD8B2A6NJW9 211 aa25.31■■□□□ 1.64
UBFD1-206ENST00000566669 BCAS2O75934 225 aaPredicted RBP25.31■■□□□ 1.64
UBFD1-206ENST00000566669 LRATO95237 230 aa25.31■■□□□ 1.64
UBFD1-206ENST00000566669 ACTL6AO96019 429 aa25.31■■□□□ 1.64
UBFD1-206ENST00000566669 ABCB1P08183 1280 aaPredicted RBP25.31■■□□□ 1.64
UBFD1-206ENST00000566669 S1PR1P21453 382 aa25.31■■□□□ 1.64
UBFD1-206ENST00000566669 DNAJA1P31689 397 aaKnown RBP25.31■■□□□ 1.64
UBFD1-206ENST00000566669 ART1P52961 327 aa25.31■■□□□ 1.64
UBFD1-206ENST00000566669 SCIMPQ6UWF3 145 aa25.31■■□□□ 1.64
UBFD1-206ENST00000566669 TMEM64Q6YI46 380 aa25.31■■□□□ 1.64
UBFD1-206ENST00000566669 KIF18BQ86Y91 864 aa25.31■■□□□ 1.64
UBFD1-206ENST00000566669 UCN3Q969E3 161 aa25.31■■□□□ 1.64
UBFD1-206ENST00000566669 NTNG2Q96CW9 530 aa25.31■■□□□ 1.64
UBFD1-206ENST00000566669 LCORQ96JN0 433 aaPredicted RBP25.31■■□□□ 1.64
UBFD1-206ENST00000566669 GNRHR2Q96P88 292 aa25.31■■□□□ 1.64
UBFD1-206ENST00000566669 SHCBP1LQ9BZQ2 653 aa25.31■■□□□ 1.64
UBFD1-206ENST00000566669 BRINP2Q9C0B6 783 aa25.31■■□□□ 1.64
UBFD1-206ENST00000566669 CALHM2Q9HA72 323 aa25.31■■□□□ 1.64
UBFD1-206ENST00000566669 ZNF639Q9UID6 485 aa25.31■■□□□ 1.64
UBFD1-206ENST00000566669 STK38LQ9Y2H1 464 aa25.31■■□□□ 1.64
UBFD1-206ENST00000566669 A0A087WUV0 522 aaPredicted RBP25.3■■□□□ 1.64
UBFD1-206ENST00000566669 FAM221AA4D161 298 aa25.3■■□□□ 1.64
UBFD1-206ENST00000566669 GOSR1O95249 250 aa25.3■■□□□ 1.64
UBFD1-206ENST00000566669 KRT6AP02538 564 aa25.3■■□□□ 1.64
UBFD1-206ENST00000566669 KRT6BP04259 564 aa25.3■■□□□ 1.64
UBFD1-206ENST00000566669 SNRPAP09012 282 aaKnown RBP25.3■■□□□ 1.64
UBFD1-206ENST00000566669 TAC1P20366 129 aa25.3■■□□□ 1.64
UBFD1-206ENST00000566669 BMP5P22003 454 aa25.3■■□□□ 1.64
UBFD1-206ENST00000566669 UQCRC1P31930 480 aa25.3■■□□□ 1.64
UBFD1-206ENST00000566669 KRT6CP48668 564 aa25.3■■□□□ 1.64
UBFD1-206ENST00000566669 RCAN2Q14206 197 aa25.3■■□□□ 1.64
UBFD1-206ENST00000566669 TOMM20Q15388 145 aa25.3■■□□□ 1.64
UBFD1-206ENST00000566669 SGO1Q5FBB7 561 aa25.3■■□□□ 1.64
UBFD1-206ENST00000566669 FNDC7Q5VTL7 733 aa25.3■■□□□ 1.64
UBFD1-206ENST00000566669 SEM1Q6ZVN7 128 aa25.3■■□□□ 1.64
UBFD1-206ENST00000566669 CHDHQ8NE62 594 aaPredicted RBP25.3■■□□□ 1.64
UBFD1-206ENST00000566669 CTHRC1Q96CG8 243 aa25.3■■□□□ 1.64
UBFD1-206ENST00000566669 KLHL29Q96CT2 875 aa25.3■■□□□ 1.64
UBFD1-206ENST00000566669 FOXC2Q99958 501 aa25.3■■□□□ 1.64
UBFD1-206ENST00000566669 POLDIP3Q9BY77 421 aaKnown RBP25.3■■□□□ 1.64
UBFD1-206ENST00000566669 NXF5Q9H1B4 397 aaKnown RBP25.3■■□□□ 1.64
UBFD1-206ENST00000566669 VPS29Q9UBQ0 182 aa25.3■■□□□ 1.64
UBFD1-206ENST00000566669 BCAP29Q9UHQ4 241 aa25.3■■□□□ 1.64
UBFD1-206ENST00000566669 MTORP42345 2549 aa25.29■■□□□ 1.64
UBFD1-206ENST00000566669 SETD2Q9BYW2 2564 aaPredicted RBP25.29■■□□□ 1.64
UBFD1-206ENST00000566669 NINQ8N4C6 2090 aa25.29■■□□□ 1.64
UBFD1-206ENST00000566669 A0A1W2PS29 197 aa25.29■■□□□ 1.64
UBFD1-206ENST00000566669 ABCB7O75027 752 aa25.29■■□□□ 1.64
UBFD1-206ENST00000566669 ERAL1O75616 437 aaKnown RBP25.29■■□□□ 1.64
UBFD1-206ENST00000566669 URI1O94763 535 aaPredicted RBP25.29■■□□□ 1.64
UBFD1-206ENST00000566669 PDYNP01213 254 aa25.29■■□□□ 1.64
UBFD1-206ENST00000566669 DRD5P21918 477 aa25.29■■□□□ 1.64
UBFD1-206ENST00000566669 OPRM1P35372 400 aa25.29■■□□□ 1.64
UBFD1-206ENST00000566669 GALNT1Q10472 559 aaPredicted RBP25.29■■□□□ 1.64
UBFD1-206ENST00000566669 RASA2Q15283 850 aa25.29■■□□□ 1.64
UBFD1-206ENST00000566669 FLYWCH1Q4VC44 716 aa25.29■■□□□ 1.64
UBFD1-206ENST00000566669 ZZZ3Q8IYH5 903 aa25.29■■□□□ 1.64
UBFD1-206ENST00000566669 ABTB1Q969K4 478 aaPredicted RBP25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms