RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 ELAVL1Q15717 326 aaKnown RBP11.78□□□□□ -0.52
SF3B3-206ENST00000565990 ZNF750Q32MQ0 723 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 C11orf91Q3C1V1 193 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 GRAMD1BQ3KR37 738 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 CPTPQ5TA50 214 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 FAAH2Q6GMR7 532 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 C8orf82Q6P1X6 216 aaPredicted RBP11.78□□□□□ -0.52
SF3B3-206ENST00000565990 DGAT2L6Q6ZPD8 337 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 MRGPREQ86SM8 312 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 FUNDC1Q8IVP5 155 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 CCDC116Q8IYX3 515 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 MIER2Q8N344 545 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 PACRGLQ8N7B6 248 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 ZSCAN1Q8NBB4 408 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 MORN4Q8NDC4 146 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 SUN3Q8TAQ9 357 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 EXOSC8Q96B26 276 aaKnown RBP11.78□□□□□ -0.52
SF3B3-206ENST00000565990 C8orf44Q96CB5 159 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 CTHRC1Q96CG8 243 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 CCDC124Q96CT7 223 aaKnown RBP11.78□□□□□ -0.52
SF3B3-206ENST00000565990 CATSPER2Q96P56 530 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 DCBLD2Q96PD2 775 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 HOPXQ9BPY8 73 aaPredicted RBP11.78□□□□□ -0.52
SF3B3-206ENST00000565990 PELOQ9BRX2 385 aaKnown RBP11.78□□□□□ -0.52
SF3B3-206ENST00000565990 BHLHE41Q9C0J9 482 aaPredicted RBP11.78□□□□□ -0.52
SF3B3-206ENST00000565990 ADAP2Q9NPF8 381 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 MIEF1Q9NQG6 463 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 ACSS1Q9NUB1 689 aaPredicted RBP11.78□□□□□ -0.52
SF3B3-206ENST00000565990 SH3BP4Q9P0V3 963 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 C5AR2Q9P296 337 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 ZNF639Q9UID6 485 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 NDUFAF1Q9Y375 327 aa11.78□□□□□ -0.52
SF3B3-206ENST00000565990 TCRBV3S1A0A5B6 114 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 DDAH2O95865 285 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 IL6P05231 212 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 IFI6P09912 130 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 UBTFL6P0CB48 400 aaPredicted RBP11.77□□□□□ -0.53
SF3B3-206ENST00000565990 ICAM2P13598 275 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 S1PR1P21453 382 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 MPIP34949 423 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 HPCAL1P37235 193 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 FEN1P39748 380 aaKnown RBP11.77□□□□□ -0.53
SF3B3-206ENST00000565990 RPL5P46777 297 aaKnown RBP11.77□□□□□ -0.53
SF3B3-206ENST00000565990 OR4D2P58180 307 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 PSME3P61289 254 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 RHDQ02161 417 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 VAC14Q08AM6 782 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 CDC20Q12834 499 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 CEACAM7Q14002 265 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 DPY19L1Q2PZI1 675 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 PRICKLE4Q2TBC4 344 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 ZNF385BQ569K4 471 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 PAOXQ6QHF9 649 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 BLOC1S3Q6QNY0 202 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 CDC26Q8NHZ8 85 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 PSMA8Q8TAA3 256 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 RIT1Q92963 219 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 PPWD1Q96BP3 646 aaKnown RBP11.77□□□□□ -0.53
SF3B3-206ENST00000565990 AMDHD1Q96NU7 426 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 LPAR4Q99677 370 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 DUSP26Q9BV47 211 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 OSBPL11Q9BXB4 747 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 SEMA4CQ9C0C4 833 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 CXorf21Q9HAI6 301 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 SPAG4Q9NPE6 437 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 SLAMF7Q9NQ25 335 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 ATAD3AQ9NVI7 634 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 ZMIZ1Q9ULJ6 1067 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 G3BP2Q9UN86 482 aaKnown RBP11.77□□□□□ -0.53
SF3B3-206ENST00000565990 ERVK-11Q9UQG0 969 aa11.77□□□□□ -0.53
SF3B3-206ENST00000565990 ZZEF1O43149 2961 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 C15orf38-AP3S2A0A0A6YYH1 394 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 IGHV3-20A0A0C4DH32 117 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 MYOCOSA0A1B0GUC4 107 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 FAM234BA2RU67 622 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 CDC14CA4D256 554 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 SAGE2PA6NJ88 616 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 AQP12BA6NM10 295 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 C17orf105B2RV13 164 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 PDLIM1O00151 329 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 PLOD2O00469 737 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 PEX12O00623 359 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 DNAJA2O60884 412 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 SLITRK5O94991 958 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 COX7A2P14406 83 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 SLC7A1P30825 629 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 NME5P56597 212 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 TMPRSS3P57727 454 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 TXNL4AP83876 142 aaKnown RBP11.76□□□□□ -0.53
SF3B3-206ENST00000565990 PLIN5Q00G26 463 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 FUT7Q11130 342 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 BNIP2Q12982 314 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 ZNF628Q5EBL2 1059 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 DCAF10Q5QP82 559 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 ATP1A1-AS1Q5TC04 95 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 RNF220Q5VTB9 566 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 LPCAT4Q643R3 524 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 PLAG1Q6DJT9 500 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 ANKRD26P1Q6NSI1 321 aa11.76□□□□□ -0.53
SF3B3-206ENST00000565990 FAM180BQ6P0A1 224 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms