RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 IKZF5Q9H5V7 419 aa10.37□□□□□ -0.75
SF3B3-205ENST00000564899 NECTIN3Q9NQS3 549 aa10.37□□□□□ -0.75
SF3B3-205ENST00000564899 GPN3Q9UHW5 284 aaPredicted RBP10.37□□□□□ -0.75
SF3B3-205ENST00000564899 MKL2Q9ULH7 1088 aa10.37□□□□□ -0.75
SF3B3-205ENST00000564899 AP3M1Q9Y2T2 418 aa10.37□□□□□ -0.75
SF3B3-205ENST00000564899 CLDN16Q9Y5I7 305 aa10.37□□□□□ -0.75
SF3B3-205ENST00000564899 IGKV3D-11A0A0A0MRZ8 115 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 VSTM2BA6NLU5 285 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 CIB2O75838 187 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 SLITRK5O94991 958 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 TNFSF15O95150 251 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 KRT75O95678 551 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 ALBP02768 609 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 IFNA16P05015 189 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 HEXBP07686 556 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 STT3AP46977 705 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 CCT3P49368 545 aaKnown RBP10.36□□□□□ -0.75
SF3B3-205ENST00000564899 PRR5P85299 388 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 LIPEQ05469 1076 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 BIKQ13323 160 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 NKG7Q16617 165 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 ZNF628Q5EBL2 1059 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 PIGGQ5H8A4 983 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 C6orf163Q5TEZ5 329 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 SAXO2Q658L1 398 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 CPZQ66K79 652 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 PGM2L1Q6PCE3 622 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 FAM198BQ6UWH4 519 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 C6orf15Q6UXA7 325 aaPredicted RBP10.36□□□□□ -0.75
SF3B3-205ENST00000564899 SHISA6Q6ZSJ9 500 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 HPS6Q86YV9 775 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 GALNT12Q8IXK2 581 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 C7orf57Q8NEG2 295 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 OR56A1Q8NGH5 318 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 OR52N2Q8NGI0 321 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 ZNF675Q8TD23 568 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 KAT2AQ92830 837 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 PPWD1Q96BP3 646 aaKnown RBP10.36□□□□□ -0.75
SF3B3-205ENST00000564899 MOAP1Q96BY2 351 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 CCDC124Q96CT7 223 aaKnown RBP10.36□□□□□ -0.75
SF3B3-205ENST00000564899 ELP4Q96EB1 424 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 NEURL3Q96EH8 262 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 ECSITQ9BQ95 431 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 VN1R1Q9GZP7 353 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 CHST8Q9H2A9 424 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 SLC26A1Q9H2B4 701 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 RAD21L1Q9H4I0 556 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 SOX17Q9H6I2 414 aaPredicted RBP10.36□□□□□ -0.75
SF3B3-205ENST00000564899 AKIRIN1Q9H9L7 192 aaPredicted RBP10.36□□□□□ -0.75
SF3B3-205ENST00000564899 ZCCHC3Q9NUD5 404 aaKnown RBP10.36□□□□□ -0.75
SF3B3-205ENST00000564899 DDX18Q9NVP1 670 aaKnown RBP10.36□□□□□ -0.75
SF3B3-205ENST00000564899 FOXJ2Q9P0K8 574 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 NXT1Q9UKK6 140 aaKnown RBP10.36□□□□□ -0.75
SF3B3-205ENST00000564899 CORO2BQ9UQ03 480 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 PCDHGA8Q9Y5G5 932 aa10.36□□□□□ -0.75
SF3B3-205ENST00000564899 SYNDIG1LA6NDD5 238 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 PRORSD1PA6NEY8 169 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 CDRT15L2A8MXV6 281 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 PLOD2O00469 737 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 EMC8O43402 210 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 DNAJA2O60884 412 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 CNOT3O75175 753 aaKnown RBP10.35□□□□□ -0.75
SF3B3-205ENST00000564899 RECKO95980 971 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 C1QCP02747 245 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 CCNYL3P0C7X3 344 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 HSD17B1P14061 328 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 TCN1P20061 433 aaPredicted RBP10.35□□□□□ -0.75
SF3B3-205ENST00000564899 ME2P23368 584 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 GSK3BP49841 420 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 EFNA3P52797 238 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 FOXL2P58012 376 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 MRPS35P82673 323 aaKnown RBP10.35□□□□□ -0.75
SF3B3-205ENST00000564899 DMTNQ08495 405 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 TP53BP2Q13625 1128 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 NCF4Q15080 339 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 TGIF1Q15583 401 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 NSDHLQ15738 373 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 PRICKLE4Q2TBC4 344 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 SPATS1Q496A3 300 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.35□□□□□ -0.75
SF3B3-205ENST00000564899 MRPL14Q6P1L8 145 aaKnown RBP10.35□□□□□ -0.75
SF3B3-205ENST00000564899 FAM199XQ6PEV8 388 aaPredicted RBP10.35□□□□□ -0.75
SF3B3-205ENST00000564899 BHLHB9Q6PI77 547 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 FAM111BQ6SJ93 734 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 DGAT2L6Q6ZPD8 337 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 C6orf120Q7Z4R8 191 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 LAPTM4BQ86VI4 370 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 IFNEQ86WN2 208 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 RNF130Q86XS8 419 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 PLPP5Q8NEB5 264 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 OR7G2Q8NG99 324 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 OR10A6Q8NH74 314 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 DOK4Q8TEW6 326 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 EXTL1Q92935 676 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 RIT1Q92963 219 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 RBM18Q96H35 190 aaKnown RBP10.35□□□□□ -0.75
SF3B3-205ENST00000564899 SLC35G5Q96KT7 338 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 SLC46A1Q96NT5 459 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 SPSB2Q99619 263 aa10.35□□□□□ -0.75
SF3B3-205ENST00000564899 KCTD14Q9BQ13 255 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms