RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 SLC22A10Q63ZE4 541 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 DESI1Q6ICB0 168 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 FUNDC1Q8IVP5 155 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 IRF7Q92985 503 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 MCOLN1Q9GZU1 580 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 MKRN2Q9H000 416 aaKnown RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 OR51B5Q9H339 312 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 SLC32A1Q9H598 525 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 C6orf106Q9H6K1 298 aaPredicted RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 CCM2LQ9NUG4 571 aaPredicted RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 CLDND1Q9NY35 253 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 VAPAQ9P0L0 249 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 SCML2Q9UQR0 700 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 SPEF1Q9Y4P9 236 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 P2RX6O15547 441 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 RNASEH2AO75792 299 aaKnown RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 TM7SF2O76062 418 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 SLC22A5O76082 557 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 LINC00271P0C7V0 271 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 CTSEP14091 401 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 CD247P20963 164 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 EPHA5P54756 1037 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 ADARP55265 1226 aaKnown RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 PSME3P61289 254 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 YPEL5P62699 121 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 RAB31Q13636 194 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 HKDC1Q2TB90 917 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.19□□□□□ -1.9
CHD9-213ENST00000564845 OR4F3Q6IEY1 312 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 ENPP6Q6UWR7 440 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 ATCAYQ86WG3 371 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 OR5AR1Q8NGP9 310 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 LPGAT1Q92604 370 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 CLIP3Q96DZ5 547 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 GRIP2Q9C0E4 1043 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 MAGIXQ9H6Y5 334 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 RANBP3Q9H6Z4 567 aaPredicted RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 IL21Q9HBE4 155 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 SLC52A3Q9NQ40 469 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 PAK6Q9NQU5 681 aaPredicted RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 MED17Q9NVC6 651 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 KCNG2Q9UJ96 466 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 PLXNA4Q9HCM2 1894 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 AQP12BA6NM10 295 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 RIIAD1A6NNX1 92 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 MYO1GB0I1T2 1018 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 GNB5O14775 395 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 CACNG3O60359 315 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 GKN3PP0CG01 181 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 MATN1P21941 496 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 RPL5P46777 297 aaKnown RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 ATP4BP51164 291 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 CLCN4P51793 760 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 SSBP1Q04837 148 aaKnown RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 ADGRE1Q14246 886 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 TECRLQ5HYJ1 363 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 FIGLAQ6QHK4 219 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 LRRC69Q6ZNQ3 347 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 AQP12AQ8IXF9 295 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 SCML4Q8N228 414 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 OR10A6Q8NH74 314 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 SUN5Q8TC36 379 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 MAGEE2Q8TD90 523 aaPredicted RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 TRUB1Q8WWH5 349 aaKnown RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 ATOH1Q92858 354 aaPredicted RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 TRMT61BQ9BVS5 477 aaKnown RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 OR51E2Q9H255 320 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 IPPKQ9H8X2 491 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 RDH14Q9HBH5 336 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 SIRPGQ9P1W8 387 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 LIMD1Q9UGP4 676 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 WDR37Q9Y2I8 494 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 C7orf72A4D263 438 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 POM121CA8CG34 1229 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 ACOT7O00154 380 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 MITFO75030 526 aaPredicted RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 RDH16O75452 317 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 APODP05090 189 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 CNR2P34972 360 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 KHKP50053 298 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 PLA2G16P53816 162 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 CLCQ05315 142 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 ELOCQ15369 112 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 TAF1AQ15573 450 aaPredicted RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 GPR68Q15743 365 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 PRSS53Q2L4Q9 553 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 PTCHD3Q3KNS1 767 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 FAM174BQ3ZCQ3 159 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 LACTB2Q53H82 288 aaPredicted RBP3.19□□□□□ -1.9
CHD9-213ENST00000564845 PRAMEF8Q5VWM4 474 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 PRAMEF7Q5VXH5 474 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 POMZP3Q6PJE2 187 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 FAM217AQ8IXS0 508 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 LIX1Q8N485 282 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 C11orf65Q8NCR3 313 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 OR2I1PQ8NGU4 316 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 CHPT1Q8WUD6 406 aa3.19□□□□□ -1.9
CHD9-213ENST00000564845 TANKQ92844 425 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms