RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 BCLAF3A2AJT9 711 aaKnown RBP3.81□□□□□ -1.8
LINC00560-201ENST00000564593 CFLARO15519 480 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 B3GALNT1O75752 331 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 IGHG1P01857 330 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 ZCCHC18P0CG32 403 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 FOSL2P15408 326 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 CALML3P27482 149 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 TRIM23P36406 574 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 MATKP42679 507 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 SLC1A4P43007 532 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 ASMTP46597 345 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 SLC6A8P48029 635 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 MYBPC1Q00872 1141 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 FCHO2Q0JRZ9 810 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 SHROOM1Q2M3G4 852 aaPredicted RBP3.81□□□□□ -1.8
LINC00560-201ENST00000564593 ZNF528Q3MIS6 628 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 UNC50Q53HI1 259 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 AGAP7PQ5VUJ5 663 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 PAQR6Q6TCH4 344 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 FAM159AQ6UWV7 190 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 C14orf79Q96F83 325 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 HSD17B14Q9BPX1 270 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 RBM4BQ9BQ04 359 aaKnown RBP3.81□□□□□ -1.8
LINC00560-201ENST00000564593 JPT2Q9H910 190 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 SOHLH2Q9NX45 425 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 TAS2R16Q9NYV7 291 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 IL20RAQ9UHF4 553 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.81□□□□□ -1.8
LINC00560-201ENST00000564593 KLHDC2Q9Y2U9 406 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 ATG4BQ9Y4P1 393 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 KIAA0586Q9BVV6 1533 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 ROCK1Q13464 1354 aa3.81□□□□□ -1.8
LINC00560-201ENST00000564593 TEX48A0A1B0GUV7 120 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 RNF212BA8MTL3 300 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 K7ERI5 159 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 ADAM12O43184 909 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 PTBP3O95758 552 aaKnown RBP3.8□□□□□ -1.8
LINC00560-201ENST00000564593 HPRP00739 348 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 GSTA1P08263 222 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 LMO2P25791 158 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 SPRP35270 261 aaPredicted RBP3.8□□□□□ -1.8
LINC00560-201ENST00000564593 ETV5P41161 510 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 MAGEA4P43358 317 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 CAMLGP49069 296 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 VEGFCP49767 419 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 GSTO1P78417 241 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 SNX1Q13596 522 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 RAPSNQ13702 412 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 ENPP2Q13822 863 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 GLIPR1L2Q4G1C9 344 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 RAET1GQ6H3X3 334 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 IRGCQ6NXR0 463 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 ZNF343Q6P1L6 599 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 ZCCHC12Q6PEW1 402 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 PHC2Q8IXK0 858 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 ABHD12Q8N2K0 398 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 RNF148Q8N7C7 305 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 OR56B1Q8NGI3 324 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 MRPL38Q96DV4 380 aaKnown RBP3.8□□□□□ -1.8
LINC00560-201ENST00000564593 CCDC28BQ9BUN5 200 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 HEXA-AS1Q9H8Q6 139 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 Q9HAA7 133 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 ELL3Q9HB65 397 aaPredicted RBP3.8□□□□□ -1.8
LINC00560-201ENST00000564593 NGBQ9NPG2 151 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 ACTR3BQ9P1U1 418 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 CPQQ9Y646 472 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 KIF14Q15058 1648 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 FAM205AQ6ZU69 1335 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 C19orf81C9J6K1 198 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 GAS8-AS1O95177 125 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 SERPINB2P05120 415 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 CCDC159P0C7I6 412 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 RALAP11233 206 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 CHRNA3P32297 505 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 ACY1Q03154 408 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 GABPB1Q06547 395 aaPredicted RBP3.8□□□□□ -1.8
LINC00560-201ENST00000564593 PDIA5Q14554 519 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 FAM182AQ5T1J6 154 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 WDR25Q64LD2 544 aaPredicted RBP3.8□□□□□ -1.8
LINC00560-201ENST00000564593 DPY19L2P2Q6ZN68 376 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 GPRIN3Q6ZVF9 776 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 LUZP1Q86V48 1076 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 AMZ2Q86W34 360 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 PYROXD2Q8N2H3 581 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 C4orf32Q8N8J7 132 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 DQX1Q8TE96 717 aaKnown RBP3.8□□□□□ -1.8
LINC00560-201ENST00000564593 FCGR1BQ92637 280 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 TAF15Q92804 592 aaKnown RBP eCLIP3.8□□□□□ -1.8
LINC00560-201ENST00000564593 NDUFAF3Q9BU61 184 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 NMNAT2Q9BZQ4 307 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 IL1RL2Q9HB29 575 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 NRN1Q9NPD7 142 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 SEC14L4Q9UDX3 406 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 BCAP29Q9UHQ4 241 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 IKZF3Q9UKT9 509 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 SPATA2Q9UM82 520 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 SLC9A8Q9Y2E8 581 aa3.8□□□□□ -1.8
LINC00560-201ENST00000564593 MTF2Q9Y483 593 aaPredicted RBP3.8□□□□□ -1.8
LINC00560-201ENST00000564593 GRIN2AQ12879 1464 aa3.79□□□□□ -1.8
LINC00560-201ENST00000564593 A0A0A6YYD4 124 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms