RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 CDKN2CP42773 168 aa12.61□□□□□ -0.39
CLK3-206ENST00000562078 SEMG2Q02383 582 aa12.61□□□□□ -0.39
CLK3-206ENST00000562078 RAB30Q15771 203 aa12.61□□□□□ -0.39
CLK3-206ENST00000562078 GPR33Q49SQ1 333 aa12.61□□□□□ -0.39
CLK3-206ENST00000562078 DGKKQ5KSL6 1271 aa12.61□□□□□ -0.39
CLK3-206ENST00000562078 BICRALQ6AI39 1079 aa12.61□□□□□ -0.39
CLK3-206ENST00000562078 RGS7BPQ6MZT1 257 aaPredicted RBP12.61□□□□□ -0.39
CLK3-206ENST00000562078 RTL10Q7L3V2 364 aa12.61□□□□□ -0.39
CLK3-206ENST00000562078 STK40Q8N2I9 435 aa12.61□□□□□ -0.39
CLK3-206ENST00000562078 CHCHD4Q8N4Q1 142 aa12.61□□□□□ -0.39
CLK3-206ENST00000562078 CLDN22Q8N7P3 220 aa12.61□□□□□ -0.39
CLK3-206ENST00000562078 OR52J3Q8NH60 311 aa12.61□□□□□ -0.39
CLK3-206ENST00000562078 FIBINQ8TAL6 211 aa12.61□□□□□ -0.39
CLK3-206ENST00000562078 DPY30Q9C005 99 aa12.61□□□□□ -0.39
CLK3-206ENST00000562078 P2RY12Q9H244 342 aa12.61□□□□□ -0.39
CLK3-206ENST00000562078 ZNF768Q9H5H4 540 aaKnown RBP12.61□□□□□ -0.39
CLK3-206ENST00000562078 ZFYVE1Q9HBF4 777 aa12.61□□□□□ -0.39
CLK3-206ENST00000562078 KCTD5Q9NXV2 234 aa12.61□□□□□ -0.39
CLK3-206ENST00000562078 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.6□□□□□ -0.39
CLK3-206ENST00000562078 ZNF821O75541 412 aaPredicted RBP12.6□□□□□ -0.39
CLK3-206ENST00000562078 CLDN7O95471 211 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 RHOP08100 348 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 HBQ1P09105 142 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 POU2F1P14859 743 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 HOXB6P17509 224 aaKnown RBP12.6□□□□□ -0.39
CLK3-206ENST00000562078 POU3F2P20265 443 aaPredicted RBP12.6□□□□□ -0.39
CLK3-206ENST00000562078 SLC6A1P30531 599 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 RECQLP46063 649 aaPredicted RBP12.6□□□□□ -0.39
CLK3-206ENST00000562078 DGKEP52429 567 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 CTBP2P56545 445 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 GPR176Q14439 515 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 SPHARQ15513 63 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 MPEG1Q2M385 716 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 DOK6Q6PKX4 331 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 PAQR6Q6TCH4 344 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 TMIGD1Q6UXZ0 262 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 ASB18Q6ZVZ8 466 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 SERPINA9Q86WD7 417 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 ADGRF3Q8IZF5 1079 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 TCEAL4Q96EI5 215 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 BOCQ9BWV1 1114 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 SLC19A3Q9BZV2 496 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 NDUFB11Q9NX14 153 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 ERVK-19Q9WJR5 959 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 YARS2Q9Y2Z4 477 aaKnown RBP12.6□□□□□ -0.39
CLK3-206ENST00000562078 MYO9BQ13459 2157 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 LOC105369274A0A096LPK9 316 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 E2F3O00716 465 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 FGF19O95750 216 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 LALBAP00709 142 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 HNRNPA1P09651 372 aaKnown RBP eCLIP12.6□□□□□ -0.39
CLK3-206ENST00000562078 OR56A5P0C7T3 313 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 JUPP14923 745 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 PIK3CGP48736 1102 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 HK3P52790 923 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 BTG1P62324 171 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 TEAD2Q15562 447 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 ARHGAP15Q53QZ3 475 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 PAQR7Q86WK9 346 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 GPSM1Q86YR5 675 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 OR4N4Q8N0Y3 316 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 OR52P1PQ8NH57 321 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 SOSTQ9BQB4 213 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 KATNB1Q9BVA0 655 aa12.6□□□□□ -0.39
CLK3-206ENST00000562078 POLR2J2Q9GZM3 115 aaKnown RBP12.6□□□□□ -0.39
CLK3-206ENST00000562078 PDCD5O14737 125 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 SOCS5O75159 536 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 IL6P05231 212 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 S100A6P06703 90 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 RHCEP18577 417 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 BTF3P20290 206 aaKnown RBP12.59□□□□□ -0.39
CLK3-206ENST00000562078 CD9P21926 228 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 HLA-FP30511 346 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 MAPK8P45983 427 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 NTHL1P78549 312 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 C18orf21Q32NC0 220 aaPredicted RBP12.59□□□□□ -0.39
CLK3-206ENST00000562078 PTRHD1Q6GMV3 140 aaKnown RBP12.59□□□□□ -0.39
CLK3-206ENST00000562078 GRASPQ7Z6J2 395 aaPredicted RBP12.59□□□□□ -0.39
CLK3-206ENST00000562078 TSPAN33Q86UF1 283 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 FAM9CQ8IZT9 166 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 FTMTQ8N4E7 242 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 OR2AP1Q8NGE2 309 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 SCMH1Q96GD3 660 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 EPYCQ99645 322 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 PRR14Q9BWN1 585 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 ASB8Q9H765 288 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 NUDT15Q9NV35 164 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 PTTG3PQ9NZH4 202 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 EMC3Q9P0I2 261 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 EDARQ9UNE0 448 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 C5orf42Q9H799 3197 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 GLYATL1P3A0A0U1RQE8 302 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 SIGLEC6O43699 453 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 SELENOFO60613 162 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 CCNB2O95067 398 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 FABP1P07148 127 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 SERPINA4P29622 427 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 PXNP49023 591 aaPredicted RBP12.59□□□□□ -0.39
CLK3-206ENST00000562078 DCDC1P59894 354 aa12.59□□□□□ -0.39
CLK3-206ENST00000562078 RPS7P62081 194 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms