RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 HSD3B2P26439 372 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 ABCD3P28288 659 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 ALDH9A1P49189 494 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 NRG3P56975 720 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 TRA2BP62995 288 aaKnown RBP9.44□□□□□ -0.9
CLK3-205ENST00000561673 RAE1P78406 368 aaKnown RBP9.44□□□□□ -0.9
CLK3-205ENST00000561673 TFF3Q07654 80 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 CSTF3Q12996 717 aaKnown RBP9.44□□□□□ -0.9
CLK3-205ENST00000561673 LCP2Q13094 533 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 DUSP8Q13202 625 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 EXOSC7Q15024 291 aaKnown RBP9.44□□□□□ -0.9
CLK3-205ENST00000561673 RPS6KA2Q15349 733 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 C6orf163Q5TEZ5 329 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 B3GNT6Q6ZMB0 384 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 SH2D5Q6ZV89 423 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 SLC22A9Q8IVM8 553 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 GSPT2Q8IYD1 628 aaKnown RBP9.44□□□□□ -0.9
CLK3-205ENST00000561673 PRR22Q8IZ63 422 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 C17orf47Q8NEP4 570 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 OR10Q1Q8NGQ4 319 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 SPPL2AQ8TCT8 520 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 SARAFQ96BY9 339 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 KLHL29Q96CT2 875 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 L3HYPDHQ96EM0 354 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 CNRIP1Q96F85 164 aaPredicted RBP9.44□□□□□ -0.9
CLK3-205ENST00000561673 LURAP1Q96LR2 239 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 ZNF681Q96N22 645 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 TTYH2Q9BSA4 534 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 FAIM2Q9BWQ8 316 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 ACPTQ9BZG2 426 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 BRINP2Q9C0B6 783 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 NXF5Q9H1B4 397 aaKnown RBP9.44□□□□□ -0.9
CLK3-205ENST00000561673 EXO5Q9H790 373 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 ACKR4Q9NPB9 350 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 ALKBH4Q9NXW9 302 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 MAT2BQ9NZL9 334 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 HEY2Q9UBP5 337 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 DCDC2Q9UHG0 476 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 BCAP29Q9UHQ4 241 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 ZNF639Q9UID6 485 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 EMCNQ9ULC0 261 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 TIMM22Q9Y584 194 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 FAM215AQ9Y5M1 114 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 CELSR1Q9NYQ6 3014 aa9.44□□□□□ -0.9
CLK3-205ENST00000561673 FAM90A27PA6NNH2 459 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 G3V2L1 256 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 UBFD1O14562 309 aaKnown RBP9.43□□□□□ -0.9
CLK3-205ENST00000561673 CBX7O95931 251 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 SHBGP04278 402 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 ABCB1P08183 1280 aaPredicted RBP9.43□□□□□ -0.9
CLK3-205ENST00000561673 PCSK2P16519 638 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 HMOX2P30519 316 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 SSTR2P30874 369 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 CASP3P42574 277 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 TRPC1P48995 793 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 HTR6P50406 440 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 PKNOX1P55347 436 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 HMGCS1Q01581 520 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 LTB4RQ15722 352 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 NNATQ16517 81 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 TRMT12Q53H54 448 aaKnown RBP9.43□□□□□ -0.9
CLK3-205ENST00000561673 TBCELQ5QJ74 424 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 WLSQ5T9L3 541 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 FNDC7Q5VTL7 733 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 TMEM198Q66K66 360 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 DESI1Q6ICB0 168 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 MEX3BQ6ZN04 569 aaKnown RBP9.43□□□□□ -0.9
CLK3-205ENST00000561673 PACS2Q86VP3 889 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 CCDC116Q8IYX3 515 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 GBP7Q8N8V2 638 aaPredicted RBP9.43□□□□□ -0.9
CLK3-205ENST00000561673 OR52R1Q8NGF1 315 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 NEIL3Q8TAT5 605 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 CTHRC1Q96CG8 243 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 NTNG2Q96CW9 530 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 APIPQ96GX9 242 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 RILPQ96NA2 401 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 GNRHR2Q96P88 292 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 KCNA7Q96RP8 456 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 SECISBP2Q96T21 854 aaKnown RBP9.43□□□□□ -0.9
CLK3-205ENST00000561673 TREX2Q9BQ50 279 aaPredicted RBP9.43□□□□□ -0.9
CLK3-205ENST00000561673 ANGPTL4Q9BY76 406 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 SLC6A15Q9H2J7 730 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 GSTO2Q9H4Y5 243 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 KCNJ16Q9NPI9 418 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 QPCTLQ9NXS2 382 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 B4GALT7Q9UBV7 327 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 MCM8Q9UJA3 840 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 UTS2RQ9UKP6 389 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 DLGAP4Q9Y2H0 992 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 PLLPQ9Y342 182 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 ZNF780BQ9Y6R6 833 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 ZNF407Q9C0G0 2248 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 EML6Q6ZMW3 1958 aa9.43□□□□□ -0.9
CLK3-205ENST00000561673 A0A0G2JNJ9 132 aa9.42□□□□□ -0.9
CLK3-205ENST00000561673 GNG14A0A1W2PPG7 69 aa9.42□□□□□ -0.9
CLK3-205ENST00000561673 SERTM1A2A2V5 107 aa9.42□□□□□ -0.9
CLK3-205ENST00000561673 PCDH7O60245 1069 aa9.42□□□□□ -0.9
CLK3-205ENST00000561673 WDR1O75083 606 aa9.42□□□□□ -0.9
CLK3-205ENST00000561673 PPM1BO75688 479 aa9.42□□□□□ -0.9
CLK3-205ENST00000561673 TRAPPC6AO75865 159 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms