RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 TMEM45AQ9NWC5 275 aa20.11■□□□□ 0.81
SNX1-206ENST00000559389 BCAP29Q9UHQ4 241 aa20.11■□□□□ 0.81
SNX1-206ENST00000559389 C19orf53Q9UNZ5 99 aaPredicted RBP20.11■□□□□ 0.81
SNX1-206ENST00000559389 ZNF451Q9Y4E5 1061 aa20.11■□□□□ 0.81
SNX1-206ENST00000559389 EPG5Q9HCE0 2579 aa20.11■□□□□ 0.81
SNX1-206ENST00000559389 FAM234BA2RU67 622 aa20.1■□□□□ 0.81
SNX1-206ENST00000559389 UPK1AO00322 258 aa20.1■□□□□ 0.81
SNX1-206ENST00000559389 COQ9O75208 318 aa20.1■□□□□ 0.81
SNX1-206ENST00000559389 PGRP06401 933 aa20.1■□□□□ 0.81
SNX1-206ENST00000559389 NCF2P19878 526 aaPredicted RBP20.1■□□□□ 0.81
SNX1-206ENST00000559389 RCAN2Q14206 197 aa20.1■□□□□ 0.81
SNX1-206ENST00000559389 LACTB2Q53H82 288 aaPredicted RBP20.1■□□□□ 0.81
SNX1-206ENST00000559389 ANXA8L1Q5VT79 327 aa20.1■□□□□ 0.81
SNX1-206ENST00000559389 LINC00696Q6ZRV3 163 aa20.1■□□□□ 0.81
SNX1-206ENST00000559389 BEST3Q8N1M1 668 aa20.1■□□□□ 0.81
SNX1-206ENST00000559389 ZNF441Q8N8Z8 693 aa20.1■□□□□ 0.81
SNX1-206ENST00000559389 GAL3ST4Q96RP7 486 aa20.1■□□□□ 0.81
SNX1-206ENST00000559389 LMF1Q96S06 567 aa20.1■□□□□ 0.81
SNX1-206ENST00000559389 ELAC2Q9BQ52 826 aaKnown RBP20.1■□□□□ 0.81
SNX1-206ENST00000559389 RNF32Q9H0A6 362 aa20.1■□□□□ 0.81
SNX1-206ENST00000559389 CDCP1Q9H5V8 836 aa20.1■□□□□ 0.81
SNX1-206ENST00000559389 EPS8L2Q9H6S3 715 aa20.1■□□□□ 0.81
SNX1-206ENST00000559389 ZBTB20Q9HC78 741 aaPredicted RBP20.1■□□□□ 0.81
SNX1-206ENST00000559389 NTMQ9P121 344 aa20.1■□□□□ 0.81
SNX1-206ENST00000559389 MYOTQ9UBF9 498 aa20.1■□□□□ 0.81
SNX1-206ENST00000559389 CFL2Q9Y281 166 aa20.1■□□□□ 0.81
SNX1-206ENST00000559389 DTX4Q9Y2E6 619 aa20.1■□□□□ 0.81
SNX1-206ENST00000559389 CACNA1GO43497 2377 aa20.1■□□□□ 0.81
SNX1-206ENST00000559389 LOC400499M0QZD8 3231 aa20.1■□□□□ 0.81
SNX1-206ENST00000559389 KMT2BQ9UMN6 2715 aaPredicted RBP20.09■□□□□ 0.81
SNX1-206ENST00000559389 SHOX2O60902 331 aaPredicted RBP20.09■□□□□ 0.81
SNX1-206ENST00000559389 IL6P05231 212 aa20.09■□□□□ 0.81
SNX1-206ENST00000559389 EMDP50402 254 aa20.09■□□□□ 0.81
SNX1-206ENST00000559389 POLR2JP52435 117 aaKnown RBP20.09■□□□□ 0.81
SNX1-206ENST00000559389 HBA1P69905 142 aa20.09■□□□□ 0.81
SNX1-206ENST00000559389 TIGD2Q4W5G0 525 aa20.09■□□□□ 0.81
SNX1-206ENST00000559389 TMEM64Q6YI46 380 aa20.09■□□□□ 0.81
SNX1-206ENST00000559389 ANKRD46Q86W74 232 aa20.09■□□□□ 0.81
SNX1-206ENST00000559389 HPS6Q86YV9 775 aa20.09■□□□□ 0.81
SNX1-206ENST00000559389 FUNDC1Q8IVP5 155 aa20.09■□□□□ 0.81
SNX1-206ENST00000559389 TM9SF4Q92544 642 aa20.09■□□□□ 0.81
SNX1-206ENST00000559389 CCDC115Q96NT0 180 aa20.09■□□□□ 0.81
SNX1-206ENST00000559389 ITPAQ9BY32 194 aa20.09■□□□□ 0.81
SNX1-206ENST00000559389 TRIM4Q9C037 500 aa20.09■□□□□ 0.81
SNX1-206ENST00000559389 RABEP2Q9H5N1 569 aa20.09■□□□□ 0.81
SNX1-206ENST00000559389 CXorf36Q9H7Y0 433 aa20.09■□□□□ 0.81
SNX1-206ENST00000559389 ABI3Q9P2A4 366 aa20.09■□□□□ 0.81
SNX1-206ENST00000559389 PRODH2Q9UF12 536 aa20.09■□□□□ 0.81
SNX1-206ENST00000559389 HEMK1Q9Y5R4 338 aaPredicted RBP20.09■□□□□ 0.81
SNX1-206ENST00000559389 TNRC6AQ8NDV7 1962 aaKnown RBP20.08■□□□□ 0.81
SNX1-206ENST00000559389 PRSS51A0A1B0GVH4 220 aa20.08■□□□□ 0.81
SNX1-206ENST00000559389 C2orf92A0A1B0GVN3 265 aa20.08■□□□□ 0.81
SNX1-206ENST00000559389 FCHO1O14526 889 aa20.08■□□□□ 0.81
SNX1-206ENST00000559389 ATXN7O15265 892 aaPredicted RBP20.08■□□□□ 0.81
SNX1-206ENST00000559389 SNX3O60493 162 aa20.08■□□□□ 0.81
SNX1-206ENST00000559389 ITGA10O75578 1167 aa20.08■□□□□ 0.81
SNX1-206ENST00000559389 SFTPCP11686 197 aa20.08■□□□□ 0.81
SNX1-206ENST00000559389 IGFL3Q6UXB1 125 aa20.08■□□□□ 0.81
SNX1-206ENST00000559389 C16orf47Q6ZP98 133 aaPredicted RBP20.08■□□□□ 0.81
SNX1-206ENST00000559389 MSANTD1Q6ZTZ1 278 aa20.08■□□□□ 0.81
SNX1-206ENST00000559389 CPLX4Q7Z7G2 160 aa20.08■□□□□ 0.81
SNX1-206ENST00000559389 CPSF7Q8N684 471 aaKnown RBP20.08■□□□□ 0.81
SNX1-206ENST00000559389 C17orf47Q8NEP4 570 aa20.08■□□□□ 0.81
SNX1-206ENST00000559389 VPS37AQ8NEZ2 397 aa20.08■□□□□ 0.81
SNX1-206ENST00000559389 ADIPOR1Q96A54 375 aa20.08■□□□□ 0.81
SNX1-206ENST00000559389 VSTM2LQ96N03 204 aa20.08■□□□□ 0.81
SNX1-206ENST00000559389 MS4A4EQ96PG1 132 aa20.08■□□□□ 0.81
SNX1-206ENST00000559389 OR52E6Q96RD3 313 aa20.08■□□□□ 0.81
SNX1-206ENST00000559389 LIN28AQ9H9Z2 209 aaKnown RBP20.08■□□□□ 0.81
SNX1-206ENST00000559389 TAS2R9Q9NYW1 312 aa20.08■□□□□ 0.81
SNX1-206ENST00000559389 CCDC167Q9P0B6 97 aa20.08■□□□□ 0.81
SNX1-206ENST00000559389 BTNL2Q9UIR0 455 aa20.08■□□□□ 0.81
SNX1-206ENST00000559389 WWP2O00308 870 aa20.07■□□□□ 0.8
SNX1-206ENST00000559389 CFLARO15519 480 aa20.07■□□□□ 0.8
SNX1-206ENST00000559389 OR2J2O76002 312 aa20.07■□□□□ 0.8
SNX1-206ENST00000559389 ABCB1P08183 1280 aaPredicted RBP20.07■□□□□ 0.8
SNX1-206ENST00000559389 LRRC74AQ0VAA2 488 aa20.07■□□□□ 0.8
SNX1-206ENST00000559389 LY6DQ14210 128 aa20.07■□□□□ 0.8
SNX1-206ENST00000559389 BLOC1S3Q6QNY0 202 aa20.07■□□□□ 0.8
SNX1-206ENST00000559389 ASB18Q6ZVZ8 466 aa20.07■□□□□ 0.8
SNX1-206ENST00000559389 OR4A15Q8NGL6 344 aa20.07■□□□□ 0.8
SNX1-206ENST00000559389 SFXN5Q8TD22 340 aa20.07■□□□□ 0.8
SNX1-206ENST00000559389 TP53INP1Q96A56 240 aa20.07■□□□□ 0.8
SNX1-206ENST00000559389 FAM120BQ96EK7 910 aaKnown RBP20.07■□□□□ 0.8
SNX1-206ENST00000559389 MAGED4Q96JG8 741 aa20.07■□□□□ 0.8
SNX1-206ENST00000559389 RASL10BQ96S79 203 aa20.07■□□□□ 0.8
SNX1-206ENST00000559389 EPN3Q9H201 632 aa20.07■□□□□ 0.8
SNX1-206ENST00000559389 FOLH1BQ9HBA9 442 aa20.07■□□□□ 0.8
SNX1-206ENST00000559389 C3orf14Q9HBI5 128 aa20.07■□□□□ 0.8
SNX1-206ENST00000559389 ZCCHC3Q9NUD5 404 aaKnown RBP20.07■□□□□ 0.8
SNX1-206ENST00000559389 MRGBPQ9NV56 204 aa20.07■□□□□ 0.8
SNX1-206ENST00000559389 STMN3Q9NZ72 180 aa20.07■□□□□ 0.8
SNX1-206ENST00000559389 ADAM21Q9UKJ8 722 aa20.07■□□□□ 0.8
SNX1-206ENST00000559389 YARS2Q9Y2Z4 477 aaKnown RBP20.07■□□□□ 0.8
SNX1-206ENST00000559389 CACNA1BQ00975 2339 aa20.07■□□□□ 0.8
SNX1-206ENST00000559389 MGAQ8IWI9 3026 aa20.06■□□□□ 0.8
SNX1-206ENST00000559389 NR5A2O00482 541 aa20.06■□□□□ 0.8
SNX1-206ENST00000559389 CDK2AP1O14519 115 aa20.06■□□□□ 0.8
SNX1-206ENST00000559389 LAMA5O15230 3695 aa20.06■□□□□ 0.8
SNX1-206ENST00000559389 EMC8O43402 210 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms