RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 B8ZZF3 427 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 SLCO1B7G3V0H7 640 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 PLOD2O00469 737 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 ADAM10O14672 748 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 PDPK1O15530 556 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 VPS4BO75351 444 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 MAPK1P28482 360 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 MAP3K8P41279 467 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 NME5P56597 212 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 AP2B1P63010 937 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 SRSF11Q05519 484 aaKnown RBP10.57□□□□□ -0.72
SNX1-204ENST00000559061 HSPB3Q12988 150 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 OR1C1Q15619 314 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 NNATQ16517 81 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 ZNF791Q3KP31 576 aaPredicted RBP10.57□□□□□ -0.72
SNX1-204ENST00000559061 PIGGQ5H8A4 983 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 IRAK1BP1Q5VVH5 260 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 DESI1Q6ICB0 168 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 SPINK14Q6IE38 97 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 TMEM64Q6YI46 380 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 MDGA2Q7Z553 956 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 WDR53Q7Z5U6 358 aaPredicted RBP10.57□□□□□ -0.72
SNX1-204ENST00000559061 HPS6Q86YV9 775 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 CLECL1Q8IZS7 167 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 OR7G1Q8NGA0 311 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 OR9I1Q8NGQ6 314 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 PSMA8Q8TAA3 256 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 NTNG2Q96CW9 530 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 ELP4Q96EB1 424 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 ART5Q96L15 291 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 VSTM2LQ96N03 204 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 ZNF317Q96PQ6 595 aaPredicted RBP10.57□□□□□ -0.72
SNX1-204ENST00000559061 TAAR6Q96RI8 345 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 BARD1Q99728 777 aaKnown RBP10.57□□□□□ -0.72
SNX1-204ENST00000559061 NXF5Q9H1B4 397 aaKnown RBP10.57□□□□□ -0.72
SNX1-204ENST00000559061 ZNF385DQ9H6B1 395 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 EPS8L2Q9H6S3 715 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 DEPPQ9NTK1 212 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 SH3BP4Q9P0V3 963 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 NTMQ9P121 344 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 PSME2Q9UL46 239 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 EIF3LQ9Y262 564 aaKnown RBP10.57□□□□□ -0.72
SNX1-204ENST00000559061 HRH3Q9Y5N1 445 aa10.57□□□□□ -0.72
SNX1-204ENST00000559061 ZNF462Q96JM2 2506 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 A0A087WV62 115 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 PINLYPA6NC86 204 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 OR6C76A6NM76 312 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 DIAPH2O60879 1101 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 IFI6P09912 130 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 CT45A8P0DMV1 189 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 CT45A9P0DMV2 189 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 PRPS1L1P21108 318 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 HPCAL1P37235 193 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 MDH1P40925 334 aaKnown RBP10.56□□□□□ -0.72
SNX1-204ENST00000559061 CASRP41180 1078 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 MRPL19P49406 292 aaKnown RBP10.56□□□□□ -0.72
SNX1-204ENST00000559061 HLCSP50747 726 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 GYS2P54840 703 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 AQP5P55064 265 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 CORO7P57737 925 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 ARG2P78540 354 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 PSG6Q00889 435 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 PMP22Q01453 160 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 MAD2L1Q13257 205 aaPredicted RBP10.56□□□□□ -0.72
SNX1-204ENST00000559061 ZNF169Q14929 603 aaPredicted RBP10.56□□□□□ -0.72
SNX1-204ENST00000559061 MLC1Q15049 377 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 CT45A2Q5DJT8 189 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 SPANXN4Q5MJ08 99 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 OR4F3Q6IEY1 312 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 SPATA19Q7Z5L4 167 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 ZADH2Q8N4Q0 377 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 C7orf57Q8NEG2 295 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 STON2Q8WXE9 905 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 TESCQ96BS2 214 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 BTBD9Q96Q07 612 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 BBS4Q96RK4 519 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 GAL3ST4Q96RP7 486 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 CXorf36Q9H7Y0 433 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 FOLH1BQ9HBA9 442 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 PROK2Q9HC23 129 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 SLC52A3Q9NQ40 469 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 PFDN4Q9NQP4 134 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 SDR39U1Q9NRG7 319 aaPredicted RBP10.56□□□□□ -0.72
SNX1-204ENST00000559061 ACSS1Q9NUB1 689 aaPredicted RBP10.56□□□□□ -0.72
SNX1-204ENST00000559061 FGFR1OP2Q9NVK5 253 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 FAM53CQ9NYF3 392 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 COPS7AQ9UBW8 275 aa10.56□□□□□ -0.72
SNX1-204ENST00000559061 C19orf53Q9UNZ5 99 aaPredicted RBP10.56□□□□□ -0.72
SNX1-204ENST00000559061 YARS2Q9Y2Z4 477 aaKnown RBP10.56□□□□□ -0.72
SNX1-204ENST00000559061 HEMK1Q9Y5R4 338 aaPredicted RBP10.56□□□□□ -0.72
SNX1-204ENST00000559061 ASPDHA6ND91 283 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 E9PBE3 544 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 PYCARD-AS1I3L0S3 204 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 KLHL41O60662 606 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 PRAMEF2O60811 474 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 TGDSO95455 350 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 C6orf47O95873 294 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 FBXO45P0C2W1 286 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 NTSP30990 170 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 MPIP34949 423 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms