RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 FRAT2O75474 233 aaPredicted RBP3.66□□□□□ -1.82
CASC4-206ENST00000558847 STK17BO94768 372 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 CALCAP01258 141 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 IFNB1P01574 187 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 SNRPCP09234 159 aaKnown RBP3.66□□□□□ -1.82
CASC4-206ENST00000558847 CALCBP10092 127 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 FUT1P19526 365 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 AXLP30530 894 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 ID1P41134 155 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 SLC7A2P52569 658 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 PPIAP62937 165 aaKnown RBP3.66□□□□□ -1.82
CASC4-206ENST00000558847 ELAVL2Q12926 359 aaKnown RBP3.66□□□□□ -1.82
CASC4-206ENST00000558847 TPD52L1Q16890 204 aaPredicted RBP3.66□□□□□ -1.82
CASC4-206ENST00000558847 LRIT3Q3SXY7 679 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 LDLRAP1Q5SW96 308 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 METTL7BQ6UX53 244 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 ISLR2Q6UXK2 745 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 TMUB2Q71RG4 321 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 LUZP1Q86V48 1076 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 AMZ2Q86W34 360 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 PHC2Q8IXK0 858 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 AQP11Q8NBQ7 271 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 CHDHQ8NE62 594 aaPredicted RBP3.66□□□□□ -1.82
CASC4-206ENST00000558847 PRSS33Q8NF86 280 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 SELENOMQ8WWX9 145 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 MOCOSQ96EN8 888 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 RBM18Q96H35 190 aaKnown RBP3.66□□□□□ -1.82
CASC4-206ENST00000558847 PRICKLE1Q96MT3 831 aaPredicted RBP3.66□□□□□ -1.82
CASC4-206ENST00000558847 TSGA13Q96PP4 275 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 SYT11Q9BT88 431 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 THUMPD2Q9BTF0 503 aaKnown RBP3.66□□□□□ -1.82
CASC4-206ENST00000558847 RBM24Q9BX46 236 aaKnown RBP3.66□□□□□ -1.82
CASC4-206ENST00000558847 ACTR8Q9H981 624 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 STARD5Q9NSY2 213 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 SLC35D1Q9NTN3 355 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 NUDT4Q9NZJ9 180 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 ATP6V1HQ9UI12 483 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 PURGQ9UJV8 347 aaKnown RBP3.66□□□□□ -1.82
CASC4-206ENST00000558847 BLOC1S6Q9UL45 172 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 EMCNQ9ULC0 261 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 DHRS7Q9Y394 339 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 DDX49Q9Y6V7 483 aaKnown RBP3.66□□□□□ -1.82
CASC4-206ENST00000558847 ABCC4O15439 1325 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 A0A1B0GWJ7 208 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 MEX3AA1L020 520 aaKnown RBP3.65□□□□□ -1.83
CASC4-206ENST00000558847 NPIPA2E9PIF3 369 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 ZNF749O43361 778 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 SNAP91O60641 907 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 ZG16O60844 167 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 DUS4LO95620 317 aaKnown RBP3.65□□□□□ -1.83
CASC4-206ENST00000558847 DIRAS3O95661 229 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 NUDT14O95848 222 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 KRT8P05787 483 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 FCGR3AP08637 254 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 THRBP10828 461 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 FOSL2P15408 326 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 DPEP1P16444 411 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 IL4RP24394 825 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 HTR2AP28223 471 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 ADSSP30520 456 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 MAT2AP31153 395 aaKnown RBP3.65□□□□□ -1.83
CASC4-206ENST00000558847 SPRP35270 261 aaPredicted RBP3.65□□□□□ -1.83
CASC4-206ENST00000558847 SGSHP51688 502 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 KRTAP10-5P60370 271 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 ERVK11-1P61568 191 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 SRYQ05066 204 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 LY6DQ14210 128 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 TMEM41BQ5BJD5 291 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 ZC2HC1BQ5TFG8 222 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 CENPLQ8N0S6 344 aaPredicted RBP3.65□□□□□ -1.83
CASC4-206ENST00000558847 CENPSQ8N2Z9 138 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 Q8NBF4 154 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 OR4F5Q8NH21 305 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 HSD17B14Q9BPX1 270 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 CABLES2Q9BTV7 478 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 ZNF416Q9BWM5 594 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 GPR174Q9BXC1 333 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 CCSER1Q9C0I3 900 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 TUBB1Q9H4B7 451 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 YAE1D1Q9NRH1 226 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 FARSBQ9NSD9 589 aaKnown RBP3.65□□□□□ -1.83
CASC4-206ENST00000558847 KLRF1Q9NZS2 232 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 P2RX2Q9UBL9 471 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 FZR1Q9UM11 496 aa3.65□□□□□ -1.83
CASC4-206ENST00000558847 TRBV5-4A0A0C4DH59 114 aa3.64□□□□□ -1.83
CASC4-206ENST00000558847 SOCS3O14543 225 aa3.64□□□□□ -1.83
CASC4-206ENST00000558847 MAPK13O15264 365 aa3.64□□□□□ -1.83
CASC4-206ENST00000558847 SMPD2O60906 423 aa3.64□□□□□ -1.83
CASC4-206ENST00000558847 POP4O95707 220 aaKnown RBP3.64□□□□□ -1.83
CASC4-206ENST00000558847 OR9G9P0C7N8 305 aa3.64□□□□□ -1.83
CASC4-206ENST00000558847 HSD17B1P14061 328 aa3.64□□□□□ -1.83
CASC4-206ENST00000558847 OXTRP30559 389 aa3.64□□□□□ -1.83
CASC4-206ENST00000558847 SLC1A4P43007 532 aa3.64□□□□□ -1.83
CASC4-206ENST00000558847 TRPC1P48995 793 aa3.64□□□□□ -1.83
CASC4-206ENST00000558847 NDUFV3P56181 108 aaKnown RBP3.64□□□□□ -1.83
CASC4-206ENST00000558847 KLHL30Q0D2K2 578 aa3.64□□□□□ -1.83
CASC4-206ENST00000558847 FUT7Q11130 342 aa3.64□□□□□ -1.83
CASC4-206ENST00000558847 ITPK1Q13572 414 aa3.64□□□□□ -1.83
CASC4-206ENST00000558847 UNC50Q53HI1 259 aa3.64□□□□□ -1.83
CASC4-206ENST00000558847 TCHHL1Q5QJ38 904 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms