RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 SYT13Q7L8C5 426 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 COMMD6Q7Z4G1 85 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 SLC9B2Q86UD5 537 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 AMIGO1Q86WK6 493 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 CALHM3Q86XJ0 350 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 MSRB3Q8IXL7 192 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 MICU2Q8IYU8 434 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 ADGRG5Q8IZF4 528 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 C2orf73Q8N5S3 287 aaPredicted RBP4.22□□□□□ -1.73
SRP54-212ENST00000556992 SRFBP1Q8NEF9 429 aaKnown RBP4.22□□□□□ -1.73
SRP54-212ENST00000556992 GPR156Q8NFN8 814 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 OR7A2PQ8NGA2 310 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 OR2A1Q8NGT9 310 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 OR10A6Q8NH74 314 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 GOT1L1Q8NHS2 421 aaPredicted RBP4.22□□□□□ -1.73
SRP54-212ENST00000556992 C16orf78Q8WTQ4 265 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 HMGB4Q8WW32 186 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 LCN9Q8WX39 176 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 LRTOMTQ8WZ04 291 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 NACC2Q96BF6 587 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 PPCDCQ96CD2 204 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 REXO5Q96IC2 774 aaKnown RBP4.22□□□□□ -1.73
SRP54-212ENST00000556992 EGLN2Q96KS0 407 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 BMFQ96LC9 184 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 PRAP1Q96NZ9 151 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 IL17FQ96PD4 163 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 C9orf16Q9BUW7 83 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 ACAT2Q9BWD1 397 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 OSBPL10Q9BXB5 764 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 REXO4Q9GZR2 422 aaKnown RBP4.22□□□□□ -1.73
SRP54-212ENST00000556992 OR51B5Q9H339 312 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 SRMSQ9H3Y6 488 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 RAD21L1Q9H4I0 556 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 PIF1Q9H611 641 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 MAGIXQ9H6Y5 334 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 KIR3DX1Q9H7L2 352 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 UBE2ZQ9H832 354 aaPredicted RBP4.22□□□□□ -1.73
SRP54-212ENST00000556992 COQ10BQ9H8M1 238 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 LMAN1LQ9HAT1 526 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 FGF22Q9HCT0 170 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 MYNNQ9NPC7 610 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 PRDM8Q9NQV8 689 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 AASDHPPTQ9NRN7 309 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 AGPAT4Q9NRZ5 378 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 OLAHQ9NV23 265 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 TAS2R7Q9NYW3 318 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 SLC25A37Q9NYZ2 338 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 VAPAQ9P0L0 249 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 SH3BP4Q9P0V3 963 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 LRIT1Q9P2V4 623 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 TAC3Q9UHF0 121 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 SCOCQ9UIL1 159 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 PLAGL1Q9UM63 463 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 VPS4AQ9UN37 437 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 KCNK6Q9Y257 313 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 WDR37Q9Y2I8 494 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 PCYT1BQ9Y5K3 369 aaPredicted RBP4.22□□□□□ -1.73
SRP54-212ENST00000556992 AP1M2Q9Y6Q5 423 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 DGKBQ9Y6T7 804 aa4.22□□□□□ -1.73
SRP54-212ENST00000556992 KMT2BQ9UMN6 2715 aaPredicted RBP4.22□□□□□ -1.73
SRP54-212ENST00000556992 ZFHX2Q9C0A1 2572 aaPredicted RBP4.21□□□□□ -1.73
SRP54-212ENST00000556992 ANKRD11Q6UB99 2663 aaPredicted RBP4.21□□□□□ -1.73
SRP54-212ENST00000556992 A0A1B0GTW7 788 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 A0A1W2PPV9 198 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 A0A1W2PRB8 838 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 LRIT2A6NDA9 550 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 FAM220BPB1ANY3 271 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 C10orf142B7Z368 130 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 SAP18O00422 153 aaKnown RBP4.21□□□□□ -1.74
SRP54-212ENST00000556992 CREG1O75629 220 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 TIPRLO75663 272 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 EPN2O95208 641 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 KCNK5O95279 499 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 FKBP9O95302 570 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 ETHE1O95571 254 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 KRT75O95678 551 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 CHRNB1P11230 501 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 PIM1P11309 404 aaPredicted RBP4.21□□□□□ -1.74
SRP54-212ENST00000556992 NCK1P16333 377 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 DDCP20711 480 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 PTPN6P29350 595 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 CD6P30203 668 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 PKLRP30613 574 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 AHRP35869 848 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 MAGEA8P43361 318 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 TSFMP43897 325 aaKnown RBP4.21□□□□□ -1.74
SRP54-212ENST00000556992 RXRGP48443 463 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 PRIM2P49643 509 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 CCT8P50990 548 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 GZMMP51124 257 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 BLKP51451 505 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 ARHGDIAP52565 204 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 MAPK12P53778 367 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 LGALS4P56470 323 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 WNT3P56703 355 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 CLDN2P57739 230 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 TAS2R50P59544 299 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 CXADRP78310 365 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 CSNK1G2P78368 415 aa4.21□□□□□ -1.74
SRP54-212ENST00000556992 REEP5Q00765 189 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms