RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 TMED10P49755 219 aaKnown RBP10.63□□□□□ -0.71
SLIRP-206ENST00000556375 NR0B1P51843 470 aaKnown RBP10.63□□□□□ -0.71
SLIRP-206ENST00000556375 PER3P56645 1201 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 NRG3P56975 720 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 RPL38P63173 70 aaKnown RBP10.63□□□□□ -0.71
SLIRP-206ENST00000556375 MRPS35P82673 323 aaKnown RBP10.63□□□□□ -0.71
SLIRP-206ENST00000556375 C2orf80Q0P641 193 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 DUSP8Q13202 625 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 EXOSC7Q15024 291 aaKnown RBP10.63□□□□□ -0.71
SLIRP-206ENST00000556375 RPS6KA2Q15349 733 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 NTRK2Q16620 822 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 UGT3A2Q3SY77 523 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 XKR7Q5GH72 579 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 BEND6Q5SZJ8 279 aaPredicted RBP10.63□□□□□ -0.71
SLIRP-206ENST00000556375 TICAM1Q8IUC6 712 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 NUDCD3Q8IVD9 361 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 CCDC116Q8IYX3 515 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 FAM9CQ8IZT9 166 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 GHDCQ8N2G8 530 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 FBXW8Q8N3Y1 598 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 OR9A2Q8NGT5 310 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 PPP1R14CQ8TAE6 165 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 AGR3Q8TD06 166 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 PAQR8Q8TEZ7 354 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 ZNF764Q96H86 408 aaPredicted RBP10.63□□□□□ -0.71
SLIRP-206ENST00000556375 MAGED4Q96JG8 741 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 PSMG3-AS1Q96PY0 264 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 FAM173AQ9BQD7 235 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 TAS2R7Q9NYW3 318 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 PRODH2Q9UF12 536 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 BCAP29Q9UHQ4 241 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 DTX4Q9Y2E6 619 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 ZNF407Q9C0G0 2248 aa10.63□□□□□ -0.71
SLIRP-206ENST00000556375 DNAJC13O75165 2243 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 PINLYPA6NC86 204 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 WIPF3A6NGB9 483 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 MYO1GB0I1T2 1018 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 TMEM114B3SHH9 223 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 G3V3Y1 287 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 ACOX3O15254 700 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 LRRTM2O43300 516 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 BCAS2O75934 225 aaPredicted RBP10.62□□□□□ -0.71
SLIRP-206ENST00000556375 GLSO94925 669 aaPredicted RBP10.62□□□□□ -0.71
SLIRP-206ENST00000556375 SLITRK5O94991 958 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 SDC1P18827 310 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 CNR1P21554 472 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 TACR1P25103 407 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 NTSP30990 170 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 MPIP34949 423 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 CA7P43166 264 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 DCAF7P61962 342 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 PLGLB1Q02325 96 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 CHI3L2Q15782 390 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 GALNTL6Q49A17 601 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 TRMT12Q53H54 448 aaKnown RBP10.62□□□□□ -0.71
SLIRP-206ENST00000556375 CMPK2Q5EBM0 449 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 C1QL3Q5VWW1 255 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 SLC22A10Q63ZE4 541 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 Q6ZPB1 254 aaPredicted RBP10.62□□□□□ -0.71
SLIRP-206ENST00000556375 RGS9BPQ6ZS82 235 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 FAM47EQ6ZV65 393 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 SIMC1Q8NDZ2 872 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 FAM13CQ8NE31 585 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 OR10G3Q8NGC4 313 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 OR52R1Q8NGF1 315 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 RELTQ969Z4 430 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 PPP3R2Q96LZ3 170 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 BBS4Q96RK4 519 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 ITPAQ9BY32 194 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 TTTY12Q9BZ98 90 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 NXF5Q9H1B4 397 aaKnown RBP10.62□□□□□ -0.71
SLIRP-206ENST00000556375 CNIH4Q9P003 139 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 ZDHHC2Q9UIJ5 367 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 EXO1Q9UQ84 846 aaKnown RBP10.62□□□□□ -0.71
SLIRP-206ENST00000556375 ZNF835Q9Y2P0 537 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 NPFFR2Q9Y5X5 522 aa10.62□□□□□ -0.71
SLIRP-206ENST00000556375 CHCHD2Q9Y6H1 151 aaPredicted RBP10.62□□□□□ -0.71
SLIRP-206ENST00000556375 MYO7BQ6PIF6 2116 aa10.61□□□□□ -0.71
SLIRP-206ENST00000556375 NINQ8N4C6 2090 aa10.61□□□□□ -0.71
SLIRP-206ENST00000556375 TRGV8A0A0C4DH27 118 aa10.61□□□□□ -0.71
SLIRP-206ENST00000556375 WDR91A4D1P6 747 aa10.61□□□□□ -0.71
SLIRP-206ENST00000556375 TP53I11O14683 189 aa10.61□□□□□ -0.71
SLIRP-206ENST00000556375 HS6ST1O60243 411 aa10.61□□□□□ -0.71
SLIRP-206ENST00000556375 PLOD3O60568 738 aa10.61□□□□□ -0.71
SLIRP-206ENST00000556375 TBX19O60806 448 aa10.61□□□□□ -0.71
SLIRP-206ENST00000556375 SKAP2O75563 359 aaPredicted RBP10.61□□□□□ -0.71
SLIRP-206ENST00000556375 SNUPNO95149 360 aaKnown RBP10.61□□□□□ -0.71
SLIRP-206ENST00000556375 HSPA4LO95757 839 aa10.61□□□□□ -0.71
SLIRP-206ENST00000556375 GRK2P25098 689 aa10.61□□□□□ -0.71
SLIRP-206ENST00000556375 ABCD3P28288 659 aa10.61□□□□□ -0.71
SLIRP-206ENST00000556375 MAPK1P28482 360 aa10.61□□□□□ -0.71
SLIRP-206ENST00000556375 PIGAP37287 484 aa10.61□□□□□ -0.71
SLIRP-206ENST00000556375 ASMTP46597 345 aa10.61□□□□□ -0.71
SLIRP-206ENST00000556375 DNASE1L1P49184 302 aa10.61□□□□□ -0.71
SLIRP-206ENST00000556375 EMDP50402 254 aa10.61□□□□□ -0.71
SLIRP-206ENST00000556375 NCBP2P52298 156 aaKnown RBP eCLIP10.61□□□□□ -0.712e-16■■■□□ 16.6
SLIRP-206ENST00000556375 CASP6P55212 293 aa10.61□□□□□ -0.71
SLIRP-206ENST00000556375 PPIAP62937 165 aaKnown RBP10.61□□□□□ -0.71
SLIRP-206ENST00000556375 HSF1Q00613 529 aa10.61□□□□□ -0.71
SLIRP-206ENST00000556375 FOXO1Q12778 655 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms