RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 COPS7BQ9H9Q2 264 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-237ENST00000556274 PELI2Q9HAT8 420 aa4.38□□□□□ -1.71
ATXN3-237ENST00000556274 GPR35Q9HC97 309 aa4.38□□□□□ -1.71
ATXN3-237ENST00000556274 KCNK9Q9NPC2 374 aa4.38□□□□□ -1.71
ATXN3-237ENST00000556274 SEMA4BQ9NPR2 832 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-237ENST00000556274 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-237ENST00000556274 GEMIN8Q9NWZ8 242 aaKnown RBP4.38□□□□□ -1.71
ATXN3-237ENST00000556274 VSX1Q9NZR4 365 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-237ENST00000556274 TMEM216Q9P0N5 145 aa4.38□□□□□ -1.71
ATXN3-237ENST00000556274 CTSFQ9UBX1 484 aa4.38□□□□□ -1.71
ATXN3-237ENST00000556274 TESQ9UGI8 421 aaKnown RBP4.38□□□□□ -1.71
ATXN3-237ENST00000556274 C3orf18Q9UK00 162 aa4.38□□□□□ -1.71
ATXN3-237ENST00000556274 ING1Q9UK53 422 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-237ENST00000556274 PTBP2Q9UKA9 531 aaKnown RBP4.38□□□□□ -1.71
ATXN3-237ENST00000556274 MRPS2Q9Y399 296 aaKnown RBP4.38□□□□□ -1.71
ATXN3-237ENST00000556274 RNF11Q9Y3C5 154 aa4.38□□□□□ -1.71
ATXN3-237ENST00000556274 KMT2BQ9UMN6 2715 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-237ENST00000556274 NBEAQ8NFP9 2946 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 KCNE1BA0A087WTH5 132 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 IGHV3-20A0A0C4DH32 117 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 WDR91A4D1P6 747 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 FAM227AF5H4B4 570 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 CYR61O00622 381 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 ERI3O43414 337 aaKnown RBP4.37□□□□□ -1.71
ATXN3-237ENST00000556274 CHST10O43529 356 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 DNAJB6O75190 326 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 VPS4BO75351 444 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 ERLIN1O75477 346 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 JRKO75564 520 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 ZFPL1O95159 310 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 CLDN9O95484 217 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 CHEK2O96017 543 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 IGHEP01854 428 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 IFNA16P05015 189 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 CAPN1P07384 714 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 GSTA1P08263 222 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 ABHD2P08910 425 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 MYL2P10916 166 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 ITGAMP11215 1152 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 SFTPCP11686 197 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 ALOX12P18054 663 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 KRT4P19013 534 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 NR1D1P20393 614 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 GCAP28676 217 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 AHRP35869 848 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 GGT5P36269 586 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 SLC26A3P40879 764 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 XCR1P46094 333 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 SLC6A12P48065 614 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 CDH13P55290 713 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 STXBP1P61764 594 aaKnown RBP4.37□□□□□ -1.71
ATXN3-237ENST00000556274 SKP1P63208 163 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 POU6F2P78424 691 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-237ENST00000556274 PHEXP78562 749 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 TGM3Q08188 693 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 SLC13A2Q13183 592 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 HERC3Q15034 1050 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 PRTGQ2VWP7 1150 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 LINC00303Q3SY05 128 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 KRT71Q3SY84 523 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 SOWAHCQ53LP3 525 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-237ENST00000556274 TECRLQ5HYJ1 363 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 CDKL4Q5MAI5 379 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 ABHD17BQ5VST6 288 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 GARNL3Q5VVW2 1013 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 ATG9BQ674R7 924 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 MED27Q6P2C8 311 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 TRIM40Q6P9F5 258 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 FAM198BQ6UWH4 519 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 ASB18Q6ZVZ8 466 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 OVCH2Q7RTZ1 564 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 LRRC70Q7Z2Q7 622 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 GOLGA7Q7Z5G4 137 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 VN1R4Q7Z5H5 301 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 SRRM1Q8IYB3 904 aaKnown RBP4.37□□□□□ -1.71
ATXN3-237ENST00000556274 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.37□□□□□ -1.71
ATXN3-237ENST00000556274 EXD3Q8N9H8 876 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 TEX19Q8NA77 164 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 Q8NA96 180 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 CLEC1AQ8NC01 280 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 ABHD11Q8NFV4 315 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 MYRIPQ8NFW9 859 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 OR4K1Q8NGD4 311 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 OR5T3Q8NGG3 340 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 OR2Y1Q8NGV0 311 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 RHEBL1Q8TAI7 183 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 C9orf43Q8TAL5 461 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-237ENST00000556274 UTP15Q8TED0 518 aaKnown RBP4.37□□□□□ -1.71
ATXN3-237ENST00000556274 TRPC4APQ8TEL6 797 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 ASB10Q8WXI3 467 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 THAP4Q8WY91 577 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.37□□□□□ -1.71
ATXN3-237ENST00000556274 UBE2E3Q969T4 207 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 TMEM125Q96AQ2 219 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 C8orf44Q96CB5 159 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 TM4SF19Q96DZ7 209 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 PTCD3Q96EY7 689 aaKnown RBP4.37□□□□□ -1.71
ATXN3-237ENST00000556274 THOC3Q96J01 351 aaKnown RBP4.37□□□□□ -1.71
ATXN3-237ENST00000556274 C10orf90Q96M02 699 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 FER1L6-AS2Q96M78 137 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms