RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 EMC8O43402 210 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 PRKNO60260 465 aaPredicted RBP11.77□□□□□ -0.53
SYNE2-219ENST00000555323 PRAMEF2O60811 474 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 SNRPB2P08579 225 aaKnown RBP11.77□□□□□ -0.53
SYNE2-219ENST00000555323 ZCCHC18P0CG32 403 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 CAPN3P20807 821 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 EFNA1P20827 205 aaPredicted RBP11.77□□□□□ -0.53
SYNE2-219ENST00000555323 ITGA3P26006 1051 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 GPC1P35052 558 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 SOX11P35716 441 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 TRPC1P48995 793 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 CCT3P49368 545 aaKnown RBP11.77□□□□□ -0.53
SYNE2-219ENST00000555323 RHDQ02161 417 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 UBAP2LQ14157 1087 aaKnown RBP11.77□□□□□ -0.53
SYNE2-219ENST00000555323 EBPQ15125 230 aaKnown RBP11.77□□□□□ -0.53
SYNE2-219ENST00000555323 MAPKAPK3Q16644 382 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 LINC00303Q3SY05 128 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 VPS26BQ4G0F5 336 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 CRB2Q5IJ48 1285 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 EXOSC6Q5RKV6 272 aaKnown RBP11.77□□□□□ -0.53
SYNE2-219ENST00000555323 ZCCHC12Q6PEW1 402 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 IGFL2Q6UWQ7 119 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 TMEM107Q6UX40 140 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 ANKRD46Q86W74 232 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 RPS19BP1Q86WX3 136 aaKnown RBP11.77□□□□□ -0.53
SYNE2-219ENST00000555323 C9orf40Q8IXQ3 194 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 ZNF441Q8N8Z8 693 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 FDCSPQ8NFU4 85 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 OR52R1Q8NGF1 315 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 C16orf52Q8NHV5 167 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 BRIX1Q8TDN6 353 aaKnown RBP11.77□□□□□ -0.53
SYNE2-219ENST00000555323 TTC9Q92623 222 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 GTF2H4Q92759 462 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 ADIPOR1Q96A54 375 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 VPS33AQ96AX1 596 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 MOAP1Q96BY2 351 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 FAM120BQ96EK7 910 aaKnown RBP11.77□□□□□ -0.53
SYNE2-219ENST00000555323 GIMAP5Q96F15 307 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 SMAD5Q99717 465 aaKnown RBP11.77□□□□□ -0.53
SYNE2-219ENST00000555323 DEFB126Q9BYW3 111 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 CXorf36Q9H7Y0 433 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 RMND5AQ9H871 391 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 ANKRA2Q9H9E1 313 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 C3orf14Q9HBI5 128 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 MYOTQ9UBF9 498 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 PRODH2Q9UF12 536 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 PCDHGB7Q9Y5F8 929 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 ASPDHA6ND91 283 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 TTC36A6NLP5 189 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 COQ9O75208 318 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 DRD5P21918 477 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 UQCRC2P22695 453 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 PTPN6P29350 595 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 MAP3K8P41279 467 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 MLF1P58340 268 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 DCAF7P61962 342 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 PRR5P85299 388 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 EXOSC7Q15024 291 aaKnown RBP11.76□□□□□ -0.53
SYNE2-219ENST00000555323 COL28A1Q2UY09 1125 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 COQ5Q5HYK3 327 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 AGAP7PQ5VUJ5 663 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 IRAK1BP1Q5VVH5 260 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 C19orf48Q6RUI8 117 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 SLC29A4Q7RTT9 530 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 DPP10Q8N608 796 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 SLC5A8Q8N695 610 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 CCDC197Q8NCU1 140 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 NUP43Q8NFH3 380 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 DNAJB8Q8NHS0 232 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 RP9Q8TA86 221 aaKnown RBP11.76□□□□□ -0.53
SYNE2-219ENST00000555323 SFXN5Q8TD22 340 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 BCAS4Q8TDM0 211 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 EXTL1Q92935 676 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 ITCHQ96J02 903 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 ZNF354BQ96LW1 612 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 VSTM2LQ96N03 204 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 AGAP4Q96P64 663 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 PANX1Q96RD7 426 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 NPAS2Q99743 824 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 INPP5KQ9BT40 448 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 DDX18Q9NVP1 670 aaKnown RBP11.76□□□□□ -0.53
SYNE2-219ENST00000555323 GPR83Q9NYM4 423 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 BCAP29Q9UHQ4 241 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 TEKT2Q9UIF3 430 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 TUBD1Q9UJT1 453 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 GPR55Q9Y2T6 319 aaPredicted RBP11.76□□□□□ -0.53
SYNE2-219ENST00000555323 NDUFAF1Q9Y375 327 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 HEMK1Q9Y5R4 338 aaPredicted RBP11.76□□□□□ -0.53
SYNE2-219ENST00000555323 GMEB1Q9Y692 573 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 CAPN7Q9Y6W3 813 aa11.76□□□□□ -0.53
SYNE2-219ENST00000555323 ANKRD11Q6UB99 2663 aaPredicted RBP11.75□□□□□ -0.53
SYNE2-219ENST00000555323 C2orf92A0A1B0GVN3 265 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 A8MUI8 341 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 CAPN14A8MX76 684 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 NR5A2O00482 541 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 NDUFAB1O14561 156 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 RFXANKO14593 260 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 TO15178 435 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 ERN1O75460 977 aaKnown RBP11.75□□□□□ -0.53
SYNE2-219ENST00000555323 DCTN3O75935 186 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms