RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 TUBD1Q9UJT1 453 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 CES1P1Q9UKY3 287 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 LHX6Q9UPM6 363 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 A6NL46 340 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 TGFBR3LH3BV60 316 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 NME4O00746 187 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 ANGPT2O15123 496 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 DNAJB5O75953 348 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 ATP1B1P05026 303 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 PORP16435 677 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-218ENST00000555213 NT5EP21589 574 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 GALNSP34059 522 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 MSX2P35548 267 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-218ENST00000555213 PGDP52209 483 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 SOX8P57073 446 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 MXRA7P84157 204 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 KCNAB2Q13303 367 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 SELPLGQ14242 412 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 MYBPC3Q14896 1274 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 MMEL1Q495T6 779 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 GTDC1Q4AE62 458 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 RUNDC3AQ59EK9 446 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 LRIF1Q5T3J3 769 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 ZNF551Q7Z340 670 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-218ENST00000555213 HPS6Q86YV9 775 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 FBXW8Q8N3Y1 598 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 SLC5A8Q8N695 610 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 PCYOX1LQ8NBM8 494 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 MORN4Q8NDC4 146 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 ZFP28Q8NHY6 868 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 TM9SF4Q92544 642 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 RIT1Q92963 219 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 VMP1Q96GC9 406 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 IMMP1LQ96LU5 166 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 PHF12Q96QT6 1004 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 BBS4Q96RK4 519 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 UBL7Q96S82 380 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-218ENST00000555213 ZBTB18Q99592 522 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 WDR77Q9BQA1 342 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-218ENST00000555213 CNPPD1Q9BV87 410 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 OR8D2Q9GZM6 311 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 SLC35C2Q9NQQ7 365 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 TAS2R7Q9NYW3 318 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 VAPAQ9P0L0 249 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 C5AR2Q9P296 337 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 ABI3Q9P2A4 366 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 PRPF19Q9UMS4 504 aaKnown RBP10.17□□□□□ -0.78
SHMT2-218ENST00000555213 PCDHB14Q9Y5E9 798 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 PCDHGA9Q9Y5G4 932 aaKnown RBP10.17□□□□□ -0.78
SHMT2-218ENST00000555213 CLDN16Q9Y5I7 305 aa10.17□□□□□ -0.78
SHMT2-218ENST00000555213 PRSS51A0A1B0GVH4 220 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 PRORSD1PA6NEY8 169 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 ACOT8O14734 319 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 PDPK1O15530 556 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 MGRN1O60291 552 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 CEACAM4O75871 244 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 PDE5AO76074 875 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 SLITRK5O94991 958 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 FAM87AP0C7U9 286 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 MPIP34949 423 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 FEN1P39748 380 aaKnown RBP10.16□□□□□ -0.78
SHMT2-218ENST00000555213 FRKP42685 505 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-218ENST00000555213 KIR3DL1P43629 444 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 GZMMP51124 257 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 CLCN2P51788 898 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 NFYCQ13952 458 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 MAPKAPK3Q16644 382 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 TRMT5Q32P41 509 aaKnown RBP10.16□□□□□ -0.78
SHMT2-218ENST00000555213 CRB2Q5IJ48 1285 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 CPTPQ5TA50 214 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 AGAP7PQ5VUJ5 663 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 MSANTD1Q6ZTZ1 278 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 ANKRD46Q86W74 232 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 CLECL1Q8IZS7 167 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 C10orf111Q8N326 155 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 VWA5B2Q8N398 1253 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 NATD1Q8N6N6 113 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 GOT1L1Q8NHS2 421 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-218ENST00000555213 C9orf43Q8TAL5 461 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-218ENST00000555213 SLC2A12Q8TD20 617 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 PTPMT1Q8WUK0 201 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-218ENST00000555213 TTC9Q92623 222 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 NCLNQ969V3 563 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 FBXL20Q96IG2 436 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 CCDC115Q96NT0 180 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 ANKRD27Q96NW4 1050 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 AGAP4Q96P64 663 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 RAB3IPQ96QF0 476 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-218ENST00000555213 CGREF1Q99674 301 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 DUSP26Q9BV47 211 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 BHLHE41Q9C0J9 482 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-218ENST00000555213 IKZF5Q9H5V7 419 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 EPS8L2Q9H6S3 715 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 SLAMF7Q9NQ25 335 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 GID8Q9NWU2 228 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 SH3BP4Q9P0V3 963 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 BTNL2Q9UIR0 455 aa10.16□□□□□ -0.78
SHMT2-218ENST00000555213 PPIEQ9UNP9 301 aaKnown RBP10.16□□□□□ -0.78
SHMT2-218ENST00000555213 NUP214P35658 2090 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-218ENST00000555213 ZFYVE26Q68DK2 2539 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms