RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 NLGN4YQ8NFZ3 816 aaPredicted RBP10.05□□□□□ -0.8
TDP1-211ENST00000555178 DNAJB8Q8NHS0 232 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 ADAMTS18Q8TE60 1221 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 PTPMT1Q8WUK0 201 aaPredicted RBP10.05□□□□□ -0.8
TDP1-211ENST00000555178 NRSN2Q9GZP1 204 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 PRDM9Q9NQV7 894 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 PNO1Q9NRX1 252 aaKnown RBP10.05□□□□□ -0.8
TDP1-211ENST00000555178 C3orf18Q9UK00 162 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 TCRBV16S1A1N1A0A5B0 115 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 ACOT8O14734 319 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 CLPSP04118 112 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 IFNA16P05015 189 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 HMGN2P05204 90 aaKnown RBP10.04□□□□□ -0.8
TDP1-211ENST00000555178 CELA2AP08217 269 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 SLC35E2P0CK97 266 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 HSD17B1P14061 328 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 DDX5P17844 614 aaKnown RBP10.04□□□□□ -0.8
TDP1-211ENST00000555178 GPX2P18283 190 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 S1PR1P21453 382 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 SDHBP21912 280 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 SSTR4P31391 388 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 DLSTP36957 453 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 ST13P50502 369 aaKnown RBP10.04□□□□□ -0.8
TDP1-211ENST00000555178 PGDP52209 483 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 EEFSECP57772 596 aaKnown RBP10.04□□□□□ -0.8
TDP1-211ENST00000555178 OCA2Q04671 838 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 LASP1Q14847 261 aaKnown RBP10.04□□□□□ -0.8
TDP1-211ENST00000555178 NSDHLQ15738 373 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 CYP51A1Q16850 503 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 FHL5Q5TD97 284 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 CPZQ66K79 652 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 CYB5D1Q6P9G0 228 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 QSOX2Q6ZRP7 698 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 MED25Q71SY5 747 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 CALHM3Q86XJ0 350 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 PTOV1Q86YD1 416 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 NATD1Q8N6N6 113 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 OR2T12Q8NG77 320 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 RAB8BQ92930 207 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 NEURL3Q96EH8 262 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 GIMAP5Q96F15 307 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 WDR77Q9BQA1 342 aaPredicted RBP10.04□□□□□ -0.8
TDP1-211ENST00000555178 CRB3Q9BUF7 120 aa10.04□□□□□ -0.8
TDP1-211ENST00000555178 CLK4Q9HAZ1 481 aaKnown RBP10.04□□□□□ -0.8
TDP1-211ENST00000555178 DDX18Q9NVP1 670 aaKnown RBP10.04□□□□□ -0.8
TDP1-211ENST00000555178 DSPP15924 2871 aaKnown RBP10.04□□□□□ -0.8
TDP1-211ENST00000555178 EVPLLA8MZ36 301 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 H0YHG0 523 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 STMND1H3BQB6 276 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 ARPC2O15144 300 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 DXOO77932 396 aaKnown RBP10.03□□□□□ -0.8
TDP1-211ENST00000555178 HEXBP07686 556 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 HOXD11P31277 338 aaPredicted RBP10.03□□□□□ -0.8
TDP1-211ENST00000555178 EMP2P54851 167 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 EEF1A2Q05639 463 aaKnown RBP10.03□□□□□ -0.8
TDP1-211ENST00000555178 CCNIQ14094 377 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 ANKRD37Q7Z713 158 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 ZZZ3Q8IYH5 903 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 ST13P4Q8IZP2 240 aaPredicted RBP10.03□□□□□ -0.8
TDP1-211ENST00000555178 NUP43Q8NFH3 380 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 OR52N2Q8NGI0 321 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 FAM110BQ8TC76 370 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 FKBP10Q96AY3 582 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 ASB9Q96DX5 294 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 DGAT2Q96PD7 388 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 CXorf21Q9HAI6 301 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 ADAP2Q9NPF8 381 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 SEMA3GQ9NS98 782 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 SUCOQ9UBS9 1254 aaKnown RBP10.03□□□□□ -0.8
TDP1-211ENST00000555178 TCFL5Q9UL49 500 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 DTX4Q9Y2E6 619 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 ANKRD11Q6UB99 2663 aaPredicted RBP10.03□□□□□ -0.8
TDP1-211ENST00000555178 ATMQ13315 3056 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 CIB2O75838 187 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 CBX7O95931 251 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 ALBP02768 609 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 CCNYL3P0C7X3 344 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 LIFP15018 202 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 STT3AP46977 705 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 DNASE1L3Q13609 305 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 FLOT2Q14254 428 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 TRIM25Q14258 630 aaKnown RBP10.03□□□□□ -0.8
TDP1-211ENST00000555178 TMEM64Q6YI46 380 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 GALNT12Q8IXK2 581 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 SAMD14Q8IZD0 417 aaPredicted RBP10.03□□□□□ -0.8
TDP1-211ENST00000555178 OR2L13Q8N349 312 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 VWA5B2Q8N398 1253 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 PLPP5Q8NEB5 264 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 BHLHE22Q8NFJ8 381 aaPredicted RBP10.03□□□□□ -0.8
TDP1-211ENST00000555178 JADE3Q92613 823 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 RIT1Q92963 219 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 RBM18Q96H35 190 aaKnown RBP10.03□□□□□ -0.8
TDP1-211ENST00000555178 SLC35G5Q96KT7 338 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 CNPPD1Q9BV87 410 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 OR51I1Q9H343 314 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 GPN3Q9UHW5 284 aaPredicted RBP10.03□□□□□ -0.8
TDP1-211ENST00000555178 ERVK-19Q9WJR5 959 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 FARSAQ9Y285 508 aaKnown RBP10.03□□□□□ -0.8
TDP1-211ENST00000555178 HS3ST3B1Q9Y662 390 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms