RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 LAMP1P11279 417 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 BPIP17213 487 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 ENDOUP21128 410 aaKnown RBP13.31□□□□□ -0.28
VTI1B-204ENST00000554659 HOXA11P31270 313 aaPredicted RBP13.31□□□□□ -0.28
VTI1B-204ENST00000554659 CNR2P34972 360 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 LUMP51884 338 aaPredicted RBP13.31□□□□□ -0.28
VTI1B-204ENST00000554659 ZNF648Q5T619 568 aaPredicted RBP13.31□□□□□ -0.28
VTI1B-204ENST00000554659 GRASPQ7Z6J2 395 aaPredicted RBP13.31□□□□□ -0.28
VTI1B-204ENST00000554659 RHBDF1Q96CC6 855 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 OR2M4Q96R27 311 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 TLR9Q9NR96 1032 aa13.31□□□□□ -0.28
VTI1B-204ENST00000554659 INTS6Q9UL03 887 aaKnown RBP13.31□□□□□ -0.28
VTI1B-204ENST00000554659 TRBV2A0A0J9YWF9 115 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 TCRBV3S1A0A5B6 114 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 GXYLT2A0PJZ3 443 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 UGDHO60701 494 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 FARS2O95363 451 aaKnown RBP13.3□□□□□ -0.28
VTI1B-204ENST00000554659 HOXB2P14652 356 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 NAA10P41227 235 aaPredicted RBP13.3□□□□□ -0.28
VTI1B-204ENST00000554659 RPS26P62854 115 aaKnown RBP13.3□□□□□ -0.28
VTI1B-204ENST00000554659 FGL1Q08830 312 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 VEZF1Q14119 521 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 GNMTQ14749 295 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 RGNQ15493 299 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 C3orf33Q6P1S2 294 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 TMEM107Q6UX40 140 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 C7orf61Q8IZ16 206 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 CHDHQ8NE62 594 aaPredicted RBP13.3□□□□□ -0.28
VTI1B-204ENST00000554659 ECHDC3Q96DC8 303 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 CNN2Q99439 309 aaKnown RBP13.3□□□□□ -0.28
VTI1B-204ENST00000554659 DHDHQ9UQ10 334 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 KDM4FA0A1W2PPD8 638 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 THEGLP0DJG4 465 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 POLR2CP19387 275 aaPredicted RBP13.3□□□□□ -0.28
VTI1B-204ENST00000554659 AGTR1P30556 359 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 DPP6P42658 865 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 KRBOX4Q5JUW0 171 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 NKAPLQ5M9Q1 402 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 LETMD1Q6P1Q0 360 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 TMPRSS12Q86WS5 348 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 GKN2Q86XP6 184 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 TMEM234Q8WY98 164 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 ATG5Q9H1Y0 275 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 PRTFDC1Q9NRG1 225 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 POT1Q9NUX5 634 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 KLHL21Q9UJP4 597 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 MUSKO15146 869 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 RPS17P08708 135 aaKnown RBP13.3□□□□□ -0.28
VTI1B-204ENST00000554659 AK4P27144 223 aaPredicted RBP13.3□□□□□ -0.28
VTI1B-204ENST00000554659 C18orf21Q32NC0 220 aaPredicted RBP13.3□□□□□ -0.28
VTI1B-204ENST00000554659 CATSPEREQ5SY80 951 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 ATAD3CQ5T2N8 411 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 OR4C11Q6IEV9 310 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 UNC5DQ6UXZ4 953 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 OR4K5Q8NGD3 323 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 C16orf78Q8WTQ4 265 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 HDHD5Q9BXW7 423 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 KDM3BQ7LBC6 1761 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 UCHL1P09936 223 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 GNSP15586 552 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 CBLP22681 906 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 CASRP41180 1078 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 LRP8Q14114 963 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 LRIF1Q5T3J3 769 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 MAMDC4Q6UXC1 1216 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 ZNF767PQ75MW2 155 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 VWA5B2Q8N398 1253 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 NDNFQ8TB73 568 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 CD200R1Q8TD46 325 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 FKBP10Q96AY3 582 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 SGTBQ96EQ0 304 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 GAS2L1Q99501 681 aaPredicted RBP13.3□□□□□ -0.28
VTI1B-204ENST00000554659 CACNG6Q9BXT2 260 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 GPR62Q9BZJ7 368 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 METTL7AQ9H8H3 244 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 GPN2Q9H9Y4 310 aaPredicted RBP13.3□□□□□ -0.28
VTI1B-204ENST00000554659 EMCNQ9ULC0 261 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 CEPT1Q9Y6K0 416 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 KAT6AQ92794 2004 aa13.3□□□□□ -0.28
VTI1B-204ENST00000554659 CCNOP22674 350 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 ACVR1BP36896 505 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 TAS2R38P59533 333 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 ZNF616Q08AN1 781 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 SNTA1Q13424 505 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 SLC22A10Q63ZE4 541 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 ZSCAN4Q8NAM6 433 aaPredicted RBP13.29□□□□□ -0.28
VTI1B-204ENST00000554659 SLC25A44Q96H78 314 aaPredicted RBP13.29□□□□□ -0.28
VTI1B-204ENST00000554659 DCAF13Q9NV06 445 aaKnown RBP13.29□□□□□ -0.28
VTI1B-204ENST00000554659 BTNL2Q9UIR0 455 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 ARNTLO00327 626 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 GCAP28676 217 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 SPINT3P49223 89 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 GATMP50440 423 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 SUOXP51687 545 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 CHRFAM7AQ494W8 412 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 B3GNT9Q6UX72 402 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 PDZD9Q8IXQ8 264 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 BEST3Q8N1M1 668 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 APIPQ96GX9 242 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 OR8D2Q9GZM6 311 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms