RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 CACNA1GO43497 2377 aa16.76■□□□□ 0.27
PSEN1-208ENST00000553719 BBIP1A8MTZ0 92 aa16.76■□□□□ 0.27
PSEN1-208ENST00000553719 DYRK3O43781 588 aa16.76■□□□□ 0.27
PSEN1-208ENST00000553719 PRKNO60260 465 aaPredicted RBP16.76■□□□□ 0.27
PSEN1-208ENST00000553719 ZCCHC18P0CG32 403 aa16.76■□□□□ 0.27
PSEN1-208ENST00000553719 COX4I1P13073 169 aa16.76■□□□□ 0.27
PSEN1-208ENST00000553719 TRPC1P48995 793 aa16.76■□□□□ 0.27
PSEN1-208ENST00000553719 EMDP50402 254 aa16.76■□□□□ 0.27
PSEN1-208ENST00000553719 VAC14Q08AM6 782 aa16.76■□□□□ 0.27
PSEN1-208ENST00000553719 CHAF1BQ13112 559 aa16.76■□□□□ 0.27
PSEN1-208ENST00000553719 BTBD16Q32M84 506 aa16.76■□□□□ 0.27
PSEN1-208ENST00000553719 C6orf163Q5TEZ5 329 aa16.76■□□□□ 0.27
PSEN1-208ENST00000553719 DLEU7Q6UYE1 221 aa16.76■□□□□ 0.27
PSEN1-208ENST00000553719 APLFQ8IW19 511 aaPredicted RBP16.76■□□□□ 0.27
PSEN1-208ENST00000553719 OR8K3Q8NH51 312 aa16.76■□□□□ 0.27
PSEN1-208ENST00000553719 PSMF1Q92530 271 aa16.76■□□□□ 0.27
PSEN1-208ENST00000553719 HOXB13Q92826 284 aaPredicted RBP16.76■□□□□ 0.27
PSEN1-208ENST00000553719 PANX1Q96RD7 426 aa16.76■□□□□ 0.27
PSEN1-208ENST00000553719 OR10A5Q9H207 317 aa16.76■□□□□ 0.27
PSEN1-208ENST00000553719 SLAMF8Q9P0V8 285 aa16.76■□□□□ 0.27
PSEN1-208ENST00000553719 MAP10Q9P2G4 905 aa16.76■□□□□ 0.27
PSEN1-208ENST00000553719 LEF1Q9UJU2 399 aaPredicted RBP16.76■□□□□ 0.27
PSEN1-208ENST00000553719 DTX4Q9Y2E6 619 aa16.76■□□□□ 0.27
PSEN1-208ENST00000553719 KCNMB2Q9Y691 235 aa16.76■□□□□ 0.27
PSEN1-208ENST00000553719 A0A096LPI6 279 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 ARGFXA6NJG6 315 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 TMEM200CA6NKL6 621 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 OR6C76A6NM76 312 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 FXYD1O00168 92 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 RFXANKO14593 260 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 ANGPT2O15123 496 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 EMC8O43402 210 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 PRAMEF2O60811 474 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 BCAS2O75934 225 aaPredicted RBP16.75■□□□□ 0.27
PSEN1-208ENST00000553719 CPSF4O95639 269 aaKnown RBP16.75■□□□□ 0.27
PSEN1-208ENST00000553719 ABCB1P08183 1280 aaPredicted RBP16.75■□□□□ 0.27
PSEN1-208ENST00000553719 ITGAMP11215 1152 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 ICAM2P13598 275 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 GPC1P35052 558 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 MAP3K8P41279 467 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 CLCN2P51788 898 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 RRADP55042 308 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 AIMP2Q13155 320 aaKnown RBP16.75■□□□□ 0.27
PSEN1-208ENST00000553719 CYLC2Q14093 348 aaPredicted RBP16.75■□□□□ 0.27
PSEN1-208ENST00000553719 EBPQ15125 230 aaKnown RBP16.75■□□□□ 0.27
PSEN1-208ENST00000553719 REP15Q6BDI9 236 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 H3F3CQ6NXT2 135 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 RNF111Q6ZNA4 994 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 POU5F2Q8N7G0 328 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 ZNF441Q8N8Z8 693 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 OR52R1Q8NGF1 315 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 C16orf52Q8NHV5 167 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 MOAP1Q96BY2 351 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 VSTM2LQ96N03 204 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 MS4A4EQ96PG1 132 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 DDX18Q9NVP1 670 aaKnown RBP16.75■□□□□ 0.27
PSEN1-208ENST00000553719 GPATCH2Q9NW75 528 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 SLC25A37Q9NYZ2 338 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 COPS7AQ9UBW8 275 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 ZMIZ1Q9ULJ6 1067 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 GMEB1Q9Y692 573 aa16.75■□□□□ 0.27
PSEN1-208ENST00000553719 ITPR1Q14643 2758 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 TRBV11-1A0A0K0K1C0 115 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 LOC100653049A0A140TA62 436 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 ERN1O75460 977 aaKnown RBP16.74■□□□□ 0.27
PSEN1-208ENST00000553719 CEACAM4O75871 244 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 KRT34O76011 436 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 C1QCP02747 245 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 UQCRC2P22695 453 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 CCT3P49368 545 aaKnown RBP16.74■□□□□ 0.27
PSEN1-208ENST00000553719 RNF4P78317 190 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 PRR5P85299 388 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 KRT72Q14CN4 511 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 DEFB109BQ30KR1 87 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 GTDC1Q4AE62 458 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 SAXO2Q658L1 398 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 JMJD6Q6NYC1 403 aaPredicted RBP16.74■□□□□ 0.27
PSEN1-208ENST00000553719 DNAJC14Q6Y2X3 702 aaPredicted RBP16.74■□□□□ 0.27
PSEN1-208ENST00000553719 GPR155Q7Z3F1 870 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 KBTBD2Q8IY47 623 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 CLEC4FQ8N1N0 589 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 OR56A1Q8NGH5 318 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 DNAJB8Q8NHS0 232 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 ZFP90Q8TF47 636 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 NPAS2Q99743 824 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 ING2Q9H160 280 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 ATP13A2Q9NQ11 1180 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 ZCCHC3Q9NUD5 404 aaKnown RBP16.74■□□□□ 0.27
PSEN1-208ENST00000553719 ARL8BQ9NVJ2 186 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.74■□□□□ 0.27
PSEN1-208ENST00000553719 VPS4AQ9UN37 437 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 PCDHGB4Q9UN71 923 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 PCDHB14Q9Y5E9 798 aa16.74■□□□□ 0.27
PSEN1-208ENST00000553719 HEMK1Q9Y5R4 338 aaPredicted RBP16.74■□□□□ 0.27
PSEN1-208ENST00000553719 RNF103-CHMP3A0A140T963 221 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 COQ9O75208 318 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 NME6O75414 186 aaPredicted RBP16.73■□□□□ 0.27
PSEN1-208ENST00000553719 GSNP06396 782 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 MVDP53602 400 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 STX5Q13190 355 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms