RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 CPSF4O95639 269 aaKnown RBP4.71□□□□□ -1.66
VTI1B-202ENST00000553619 MT-CO3P00414 261 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 GBAP04062 536 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 NR2F6P10588 404 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 FGF5P12034 268 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 FOLR1P15328 257 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 NQO1P15559 274 aaKnown RBP4.71□□□□□ -1.66
VTI1B-202ENST00000553619 PORP16435 677 aaPredicted RBP4.71□□□□□ -1.66
VTI1B-202ENST00000553619 IL1RNP18510 177 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 ITGAXP20702 1163 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 UQCRC2P22695 453 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 TSPAN7P41732 249 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 MAGEA8P43361 318 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 CPA2P48052 419 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 LIM2P55344 173 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 HSD17B7P56937 341 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 PSME3P61289 254 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 NCALDP61601 193 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 DCDP81605 110 aaKnown RBP4.71□□□□□ -1.66
VTI1B-202ENST00000553619 SLC25A3Q00325 362 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 MC2RQ01718 297 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 TNFRSF17Q02223 184 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 OCA2Q04671 838 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 ABHD18Q0P651 414 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 PDE7AQ13946 482 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 RUNX2Q13950 521 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 SERTAD2Q14140 314 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 MLC1Q15049 377 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 GPR19Q15760 415 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 UGT8Q16880 541 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 TRMT5Q32P41 509 aaKnown RBP4.71□□□□□ -1.66
VTI1B-202ENST00000553619 SPANXN4Q5MJ08 99 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 C6orf10Q5SRN2 563 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 NDUFAF5Q5TEU4 345 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 OR4F3Q6IEY1 312 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 OR52E8Q6IFG1 317 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 ADNP2Q6IQ32 1131 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 RHBDD2Q6NTF9 364 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 RINLQ6ZS11 566 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 ZNF621Q6ZSS3 439 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 MED25Q71SY5 747 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 PIP4P1Q86T03 277 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 ZNF227Q86WZ6 799 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 TICAM1Q8IUC6 712 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 TMEM126BQ8IUX1 230 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 SCUBE1Q8IWY4 988 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 DEFB107AQ8IZN7 70 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 CA13Q8N1Q1 262 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 KRTCAP2Q8N6L1 136 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 FAM47BQ8NA70 645 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 RBM15BQ8NDT2 890 aaKnown RBP4.71□□□□□ -1.66
VTI1B-202ENST00000553619 OR7A2PQ8NGA2 310 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 OR9I1Q8NGQ6 314 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 OR1L3Q8NH93 324 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 ZCCHC10Q8TBK6 192 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 GTF2H4Q92759 462 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 VPS33AQ96AX1 596 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 MOAP1Q96BY2 351 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 LRRC58Q96CX6 371 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 RCN3Q96D15 328 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 CLIP3Q96DZ5 547 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 FAM122AQ96E09 287 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 RBM18Q96H35 190 aaKnown RBP4.71□□□□□ -1.66
VTI1B-202ENST00000553619 TEX37Q96LM6 180 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 FAM210AQ96ND0 272 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 CCDC115Q96NT0 180 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 TEFMQ96QE5 360 aaKnown RBP4.71□□□□□ -1.66
VTI1B-202ENST00000553619 OR1F2PQ96R84 312 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 OR6C1Q96RD1 312 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 PANX1Q96RD7 426 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 CDRT15Q96T59 188 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 NPAS2Q99743 824 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 MAPKAP1Q9BPZ7 522 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 MACROD1Q9BQ69 325 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 THTPAQ9BU02 230 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 THUMPD3Q9BV44 507 aaKnown RBP4.71□□□□□ -1.66
VTI1B-202ENST00000553619 ZNF717Q9BY31 904 aaPredicted RBP4.71□□□□□ -1.66
VTI1B-202ENST00000553619 KRTAP17-1Q9BYP8 105 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 ASPSCR1Q9BZE9 553 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 B3GNT4Q9C0J1 378 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 LRMDAQ9H2I8 198 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 ACTL8Q9H568 366 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 SLC35C2Q9NQQ7 365 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 THUMPD1Q9NXG2 353 aaKnown RBP4.71□□□□□ -1.66
VTI1B-202ENST00000553619 TAS2R9Q9NYW1 312 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 ADA2Q9NZK5 511 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 KCMF1Q9P0J7 381 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 TMEM9Q9P0T7 183 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 UTS2RQ9UKP6 389 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 CNOT11Q9UKZ1 510 aaKnown RBP4.71□□□□□ -1.66
VTI1B-202ENST00000553619 VPS4AQ9UN37 437 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 MAN2B2Q9Y2E5 1009 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 MMACHCQ9Y4U1 282 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 SCN2AQ99250 2005 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 SEC16AO15027 2179 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 CCDC187A0A096LP49 1063 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 A0A0A6YYC8 382 aaPredicted RBP4.7□□□□□ -1.66
VTI1B-202ENST00000553619 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.7□□□□□ -1.66
VTI1B-202ENST00000553619 A0A1B0GX78 115 aa4.7□□□□□ -1.66
VTI1B-202ENST00000553619 A0A1W2PR48 441 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms