RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 SORCS1Q8WY21 1168 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 SLC35G5Q96KT7 338 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 TRMT61BQ9BVS5 477 aaKnown RBP10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 KLF16Q9BXK1 252 aaPredicted RBP10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 QRSL1Q9H0R6 528 aaKnown RBP10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 ATP13A2Q9NQ11 1180 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 STOML2Q9UJZ1 356 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 SLC45A1Q9Y2W3 748 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 CSNK1G3Q9Y6M4 447 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 SLC16A5O15375 505 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 CA12O43570 354 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 ALPPP05187 535 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 CD3GP09693 182 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 C1SP09871 688 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 C8orf89P0DMQ9 161 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 POU3F3P20264 500 aaPredicted RBP10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 DNASE1P24855 282 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 TMEM115Q12893 351 aaPredicted RBP10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 ARSIQ5FYB1 569 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 ZNF697Q5TEC3 545 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 TOMM5Q8N4H5 51 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 DNAJA4Q8WW22 397 aaPredicted RBP10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 DHRS9Q9BPW9 319 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 TAPBPLQ9BX59 468 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 ABCG4Q9H172 646 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 BRF2Q9HAW0 419 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 MRPL17Q9NRX2 175 aaKnown RBP10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 GFYI3L273 518 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 FFAR1O14842 300 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 PAHP00439 452 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 ANXA3P12429 323 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 HOXB9P17482 250 aaPredicted RBP10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 NAT1P18440 290 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 MMP11P24347 488 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 PKLRP30613 574 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 SRP9P49458 86 aaKnown RBP10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 GLYR1Q49A26 553 aaPredicted RBP10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 MPPE1Q53F39 396 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 RAET1GQ6H3X3 334 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 LSRQ86X29 649 aaPredicted RBP10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 CYB5D2Q8WUJ1 264 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 FAM46AQ96IP4 442 aaKnown RBP10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 THAP7Q9BT49 309 aaPredicted RBP10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 TNFRSF10DQ9UBN6 386 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 KCNN3Q9UGI6 736 aa10.97□□□□□ -0.65
PPFIA2-227ENST00000552948 PROM1O43490 865 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 CHST10O43529 356 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 UGDHO60701 494 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 SRPRAP08240 638 aaKnown RBP10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 MSL3P1P0C860 447 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 CCND3P30281 292 aaPredicted RBP10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 ACSL1P33121 698 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 SSR2P43308 183 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 RNF144AP50876 292 aaPredicted RBP10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 SNRPGP62308 76 aaKnown RBP10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 GDPD4Q6W3E5 623 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 CEP76Q8TAP6 659 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 HCAR2Q8TDS4 363 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 SPRYD4Q8WW59 207 aaPredicted RBP10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 SLC5A11Q8WWX8 675 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 ECHDC3Q96DC8 303 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 WDFY2Q96P53 400 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 DPAGT1Q9H3H5 408 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 DMRT3Q9NQL9 472 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 STARD7Q9NQZ5 370 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 MRPL39Q9NYK5 338 aaKnown RBP10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 TEX13CA0A0J9YWL9 993 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 TEX46H3BTG2 121 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 GABRPO00591 440 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 ALDH1A1P00352 501 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 PIPP12273 146 aaPredicted RBP10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 PRPH2P23942 346 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 CD79BP40259 229 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 GPR4P46093 362 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 VSX2P58304 361 aaPredicted RBP10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 TCEA2Q15560 299 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 C9orf64Q5T6V5 341 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 C17orf64Q86WR6 236 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 TCTE3Q8IZS6 198 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 GALNT11Q8NCW6 608 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 BTN2A2Q8WVV5 523 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 CACNG6Q9BXT2 260 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 ARHGAP39Q9C0H5 1083 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 OR51I1Q9H343 314 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 OSGEPL1Q9H4B0 414 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 FOLH1BQ9HBA9 442 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 P2RX2Q9UBL9 471 aa10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 DIMT1Q9UNQ2 313 aaKnown RBP10.96□□□□□ -0.65
PPFIA2-227ENST00000552948 B8ZZF3 427 aa10.96□□□□□ -0.66
PPFIA2-227ENST00000552948 HRO43593 1189 aa10.96□□□□□ -0.66
PPFIA2-227ENST00000552948 FGBP02675 491 aa10.96□□□□□ -0.66
PPFIA2-227ENST00000552948 MRPL3P09001 348 aaKnown RBP10.96□□□□□ -0.66
PPFIA2-227ENST00000552948 GPR162Q16538 588 aa10.96□□□□□ -0.66
PPFIA2-227ENST00000552948 TOR1AIP1Q5JTV8 583 aa10.96□□□□□ -0.66
PPFIA2-227ENST00000552948 SLCO4C1Q6ZQN7 724 aa10.96□□□□□ -0.66
PPFIA2-227ENST00000552948 ZNF614Q8N883 585 aa10.96□□□□□ -0.66
PPFIA2-227ENST00000552948 RFKQ969G6 155 aa10.96□□□□□ -0.66
PPFIA2-227ENST00000552948 PMEPA1Q969W9 287 aa10.96□□□□□ -0.66
PPFIA2-227ENST00000552948 TMEM38AQ9H6F2 299 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms