RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 PRAMEF2O60811 474 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 BCAS2O75934 225 aaPredicted RBP18.98■□□□□ 0.63
HMGA2-211ENST00000545998 OR2J2O76002 312 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 IFI6P09912 130 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 EFNA1P20827 205 aaPredicted RBP18.98■□□□□ 0.63
HMGA2-211ENST00000545998 IL12AP29459 219 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 MC3RP41968 323 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 EMDP50402 254 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 SRSF11Q05519 484 aaKnown RBP18.98■□□□□ 0.63
HMGA2-211ENST00000545998 RPS6KA2Q15349 733 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 PGS1Q32NB8 556 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 ZNF441Q8N8Z8 693 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 ELP4Q96EB1 424 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 DTX4Q9Y2E6 619 aa18.98■□□□□ 0.63
HMGA2-211ENST00000545998 YARS2Q9Y2Z4 477 aaKnown RBP18.98■□□□□ 0.63
HMGA2-211ENST00000545998 A0A0G2JND7 137 aa18.97■□□□□ 0.63
HMGA2-211ENST00000545998 A0A1W2PRB8 838 aa18.97■□□□□ 0.63
HMGA2-211ENST00000545998 F10P00742 488 aa18.97■□□□□ 0.63
HMGA2-211ENST00000545998 TROVE2P10155 538 aaKnown RBP eCLIP18.97■□□□□ 0.63
HMGA2-211ENST00000545998 TRHRP34981 398 aaPredicted RBP18.97■□□□□ 0.63
HMGA2-211ENST00000545998 ST13P50502 369 aaKnown RBP18.97■□□□□ 0.63
HMGA2-211ENST00000545998 GYS2P54840 703 aa18.97■□□□□ 0.63
HMGA2-211ENST00000545998 WNT3P56703 355 aa18.97■□□□□ 0.63
HMGA2-211ENST00000545998 ARG2P78540 354 aa18.97■□□□□ 0.63
HMGA2-211ENST00000545998 TUBA3CQ13748 450 aa18.97■□□□□ 0.63
HMGA2-211ENST00000545998 DPY19L1Q2PZI1 675 aa18.97■□□□□ 0.63
HMGA2-211ENST00000545998 ZNF468Q5VIY5 522 aaPredicted RBP18.97■□□□□ 0.63
HMGA2-211ENST00000545998 TUBA3EQ6PEY2 450 aa18.97■□□□□ 0.63
HMGA2-211ENST00000545998 OR2L13Q8N349 312 aa18.97■□□□□ 0.63
HMGA2-211ENST00000545998 ADIPOR1Q96A54 375 aa18.97■□□□□ 0.63
HMGA2-211ENST00000545998 GAL3ST4Q96RP7 486 aa18.97■□□□□ 0.63
HMGA2-211ENST00000545998 FAM53CQ9NYF3 392 aa18.97■□□□□ 0.63
HMGA2-211ENST00000545998 C19orf53Q9UNZ5 99 aaPredicted RBP18.97■□□□□ 0.63
HMGA2-211ENST00000545998 CFL2Q9Y281 166 aa18.97■□□□□ 0.63
HMGA2-211ENST00000545998 C2orf92A0A1B0GVN3 265 aa18.96■□□□□ 0.63
HMGA2-211ENST00000545998 OR5H15A6NDH6 313 aa18.96■□□□□ 0.63
HMGA2-211ENST00000545998 UPK1AO00322 258 aa18.96■□□□□ 0.63
HMGA2-211ENST00000545998 GPX3P22352 226 aa18.96■□□□□ 0.63
HMGA2-211ENST00000545998 KIR3DL1P43629 444 aa18.96■□□□□ 0.63
HMGA2-211ENST00000545998 MRPL19P49406 292 aaKnown RBP18.96■□□□□ 0.63
HMGA2-211ENST00000545998 CDK9P50750 372 aaKnown RBP18.96■□□□□ 0.63
HMGA2-211ENST00000545998 PHC1P78364 1004 aa18.96■□□□□ 0.63
HMGA2-211ENST00000545998 PIGGQ5H8A4 983 aa18.96■□□□□ 0.63
HMGA2-211ENST00000545998 SPANXN4Q5MJ08 99 aa18.96■□□□□ 0.63
HMGA2-211ENST00000545998 OR4F3Q6IEY1 312 aa18.96■□□□□ 0.63
HMGA2-211ENST00000545998 Q6ZS92 163 aa18.96■□□□□ 0.63
HMGA2-211ENST00000545998 PTRH1Q86Y79 214 aaKnown RBP18.96■□□□□ 0.63
HMGA2-211ENST00000545998 GLB1L3Q8NCI6 653 aaPredicted RBP18.96■□□□□ 0.63
HMGA2-211ENST00000545998 OR5P2Q8WZ92 322 aa18.96■□□□□ 0.63
HMGA2-211ENST00000545998 RASL10BQ96S79 203 aa18.96■□□□□ 0.63
HMGA2-211ENST00000545998 UTP23Q9BRU9 249 aaKnown RBP18.96■□□□□ 0.63
HMGA2-211ENST00000545998 MFRPQ9BY79 579 aa18.96■□□□□ 0.63
HMGA2-211ENST00000545998 ANKRD10Q9NXR5 420 aa18.96■□□□□ 0.63
HMGA2-211ENST00000545998 ZIM2Q9NZV7 527 aa18.96■□□□□ 0.63
HMGA2-211ENST00000545998 PRODH2Q9UF12 536 aa18.96■□□□□ 0.63
HMGA2-211ENST00000545998 C9JVG2 144 aa18.95■□□□□ 0.62
HMGA2-211ENST00000545998 ZNF354AO60765 605 aaPredicted RBP18.95■□□□□ 0.62
HMGA2-211ENST00000545998 SCN2BO60939 215 aa18.95■□□□□ 0.62
HMGA2-211ENST00000545998 SLC22A3O75751 556 aa18.95■□□□□ 0.62
HMGA2-211ENST00000545998 PSMG1O95456 288 aa18.95■□□□□ 0.62
HMGA2-211ENST00000545998 GPC1P35052 558 aa18.95■□□□□ 0.62
HMGA2-211ENST00000545998 CD96P40200 585 aa18.95■□□□□ 0.62
HMGA2-211ENST00000545998 TNFSF10P50591 281 aa18.95■□□□□ 0.62
HMGA2-211ENST00000545998 SSR4P51571 173 aa18.95■□□□□ 0.62
HMGA2-211ENST00000545998 KLRB1Q12918 225 aa18.95■□□□□ 0.62
HMGA2-211ENST00000545998 NFATC3Q12968 1075 aa18.95■□□□□ 0.62
HMGA2-211ENST00000545998 FAM174BQ3ZCQ3 159 aa18.95■□□□□ 0.62
HMGA2-211ENST00000545998 NADK2Q4G0N4 442 aa18.95■□□□□ 0.62
HMGA2-211ENST00000545998 MIER2Q8N344 545 aa18.95■□□□□ 0.62
HMGA2-211ENST00000545998 CATSPER1Q8NEC5 780 aa18.95■□□□□ 0.62
HMGA2-211ENST00000545998 C17orf47Q8NEP4 570 aa18.95■□□□□ 0.62
HMGA2-211ENST00000545998 PSMA8Q8TAA3 256 aa18.95■□□□□ 0.62
HMGA2-211ENST00000545998 TP53INP1Q96A56 240 aa18.95■□□□□ 0.62
HMGA2-211ENST00000545998 TMEM120AQ9BXJ8 343 aa18.95■□□□□ 0.62
HMGA2-211ENST00000545998 TRIM45Q9H8W5 580 aaPredicted RBP18.95■□□□□ 0.62
HMGA2-211ENST00000545998 SIRT3Q9NTG7 399 aaPredicted RBP18.95■□□□□ 0.62
HMGA2-211ENST00000545998 DDX18Q9NVP1 670 aaKnown RBP18.95■□□□□ 0.62
HMGA2-211ENST00000545998 NTMQ9P121 344 aa18.95■□□□□ 0.62
HMGA2-211ENST00000545998 B3GNT3Q9Y2A9 372 aa18.95■□□□□ 0.62
HMGA2-211ENST00000545998 HEMK1Q9Y5R4 338 aaPredicted RBP18.95■□□□□ 0.62
HMGA2-211ENST00000545998 RNASET2O00584 256 aaKnown RBP18.94■□□□□ 0.62
HMGA2-211ENST00000545998 NADKO95544 446 aaPredicted RBP18.94■□□□□ 0.62
HMGA2-211ENST00000545998 C6orf47O95873 294 aa18.94■□□□□ 0.62
HMGA2-211ENST00000545998 ZFP36L2P47974 494 aaKnown RBP18.94■□□□□ 0.62
HMGA2-211ENST00000545998 HLCSP50747 726 aa18.94■□□□□ 0.62
HMGA2-211ENST00000545998 SLC6A19Q695T7 634 aa18.94■□□□□ 0.62
HMGA2-211ENST00000545998 TEX19Q8NA77 164 aa18.94■□□□□ 0.62
HMGA2-211ENST00000545998 CHMP6Q96FZ7 201 aa18.94■□□□□ 0.62
HMGA2-211ENST00000545998 RILPQ96NA2 401 aa18.94■□□□□ 0.62
HMGA2-211ENST00000545998 ZBTB18Q99592 522 aa18.94■□□□□ 0.62
HMGA2-211ENST00000545998 ITPAQ9BY32 194 aa18.94■□□□□ 0.62
HMGA2-211ENST00000545998 TAS2R9Q9NYW1 312 aa18.94■□□□□ 0.62
HMGA2-211ENST00000545998 COQ9O75208 318 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 NME6O75414 186 aaPredicted RBP18.93■□□□□ 0.62
HMGA2-211ENST00000545998 PRB1P04280 392 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 S100A3P33764 101 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 HLA-DQA1Q5Y7H0 255 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 PAOXQ6QHF9 649 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 TMEM156Q8N614 296 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 SLC15A4Q8N697 577 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms