RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 FAF1Q9UNN5 650 aaPredicted RBP14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 SNX8Q9Y5X2 465 aa14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 HS3ST3B1Q9Y662 390 aa14.94□□□□□ -0.02
PRPF40A-212ENST00000545856 DCHS1Q96JQ0 3298 aa14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 LOC101059948A0A1B0GTJ6 334 aa14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 CDK2AP1O14519 115 aa14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 DNAJC8O75937 253 aaPredicted RBP14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 AK1P00568 194 aa14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 GUSBP08236 651 aa14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 KHKP50053 298 aa14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 EFNA3P52797 238 aa14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 RBBP4Q09028 425 aa14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 GNA13Q14344 377 aa14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 ZNHIT3Q15649 155 aaPredicted RBP14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 PAPD4Q6PIY7 484 aaKnown RBP14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 DNAJC14Q6Y2X3 702 aaPredicted RBP14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 NDUFAF7Q7L592 441 aa14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 C6orf120Q7Z4R8 191 aa14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 NET1Q7Z628 596 aaPredicted RBP14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 DEFB107AQ8IZN7 70 aa14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 LGI4Q8N135 537 aa14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 NUP43Q8NFH3 380 aa14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 OR7G2Q8NG99 324 aa14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 SLC2A12Q8TD20 617 aa14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 SENP5Q96HI0 755 aaPredicted RBP14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 SLC35G5Q96KT7 338 aa14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 ACTRT3Q9BYD9 372 aa14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 MUC13Q9H3R2 512 aa14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 KAT8Q9H7Z6 458 aaKnown RBP14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 DUSP22Q9NRW4 184 aa14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 PNO1Q9NRX1 252 aaKnown RBP14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 SLAMF8Q9P0V8 285 aa14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 ERVK-11Q9UQG0 969 aa14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 AKAP13Q12802 2813 aa14.93□□□□□ -0.02
PRPF40A-212ENST00000545856 APC2O95996 2303 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 IGHV1-45A0A0A0MS14 117 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 CREG1O75629 220 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 DDAH2O95865 285 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 CBX7O95931 251 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 HPP00738 406 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 HSD17B1P14061 328 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 S1PR1P21453 382 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 SLC25A3Q00325 362 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 ZNF267Q14586 743 aaPredicted RBP14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 ZNF750Q32MQ0 723 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 EXOSC6Q5RKV6 272 aaKnown RBP14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 PLAG1Q6DJT9 500 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 FAM180BQ6P0A1 224 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 CDC73Q6P1J9 531 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 RNF111Q6ZNA4 994 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 LANCL3Q6ZV70 420 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 SLC15A3Q8IY34 581 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 M1APQ8TC57 530 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 OIT3Q8WWZ8 545 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 THAP4Q8WY91 577 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 PMM1Q92871 262 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 TMEM125Q96AQ2 219 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 MCUR1Q96AQ8 359 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 ECSITQ9BQ95 431 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 WDR77Q9BQA1 342 aaPredicted RBP14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 THUMPD3Q9BV44 507 aaKnown RBP14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 OR10A5Q9H207 317 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 TMEM38AQ9H6F2 299 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 GPATCH2Q9NW75 528 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 ERVK-19Q9WJR5 959 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 LIPT1Q9Y234 373 aa14.92□□□□□ -0.02
PRPF40A-212ENST00000545856 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 A0A1W2PS29 197 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 TMEM247A6NEH6 219 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 CFAP73A6NFT4 308 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 PEX12O00623 359 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 SOCS6O14544 535 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 HMGN2P05204 90 aaKnown RBP14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 GSNP06396 782 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 COX6A1P12074 109 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 MAP3K8P41279 467 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 CLCN2P51788 898 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 GPR143P51810 404 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 SLC7A2P52569 658 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 SLC37A1P57057 533 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 MRPS35P82673 323 aaKnown RBP14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 BNIP2Q12982 314 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 MYBPC3Q14896 1274 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 PCOLCEQ15113 449 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 RGNQ15493 299 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 LTB4RQ15722 352 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 FXNQ16595 210 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 PRAMEF8Q5VWM4 474 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 PRAMEF7Q5VXH5 474 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 MFSD12Q6NUT3 480 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 RINLQ6ZS11 566 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 SHISA6Q6ZSJ9 500 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 PPP1R32Q7Z5V6 425 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 MARCH9Q86YJ5 346 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 ZNF615Q8N8J6 731 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 NFAM1Q8NET5 270 aaPredicted RBP14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 ADCY4Q8NFM4 1077 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 OR11G2Q8NGC1 345 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 OR5L2Q8NGL0 311 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 NUBPLQ8TB37 319 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms