RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 SLC48A1Q6P1K1 146 aa6.58□□□□□ -1.36
HMGCS2-204ENST00000544913 SHQ1Q6PI26 577 aaKnown RBP6.58□□□□□ -1.36
HMGCS2-204ENST00000544913 DNAJC14Q6Y2X3 702 aaPredicted RBP6.58□□□□□ -1.36
HMGCS2-204ENST00000544913 MED25Q71SY5 747 aa6.58□□□□□ -1.36
HMGCS2-204ENST00000544913 COX15Q7KZN9 410 aa6.58□□□□□ -1.36
HMGCS2-204ENST00000544913 ABHD13Q7L211 337 aa6.58□□□□□ -1.36
HMGCS2-204ENST00000544913 PIWIL3Q7Z3Z3 882 aaKnown RBP6.58□□□□□ -1.36
HMGCS2-204ENST00000544913 SLCO6A1Q86UG4 719 aa6.58□□□□□ -1.36
HMGCS2-204ENST00000544913 SLC30A8Q8IWU4 369 aa6.58□□□□□ -1.36
HMGCS2-204ENST00000544913 PSMA8Q8TAA3 256 aa6.58□□□□□ -1.36
HMGCS2-204ENST00000544913 FBXO30Q8TB52 745 aa6.58□□□□□ -1.36
HMGCS2-204ENST00000544913 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.58□□□□□ -1.36
HMGCS2-204ENST00000544913 NMD3Q96D46 503 aaKnown RBP6.58□□□□□ -1.36
HMGCS2-204ENST00000544913 DPYSL5Q9BPU6 564 aa6.58□□□□□ -1.36
HMGCS2-204ENST00000544913 GABARAPL1Q9H0R8 117 aa6.58□□□□□ -1.36
HMGCS2-204ENST00000544913 EPS8L2Q9H6S3 715 aa6.58□□□□□ -1.36
HMGCS2-204ENST00000544913 APMAPQ9HDC9 416 aa6.58□□□□□ -1.36
HMGCS2-204ENST00000544913 LYARQ9NX58 379 aaKnown RBP6.58□□□□□ -1.36
HMGCS2-204ENST00000544913 VPS4AQ9UN37 437 aa6.58□□□□□ -1.36
HMGCS2-204ENST00000544913 USP22Q9UPT9 525 aa6.58□□□□□ -1.36
HMGCS2-204ENST00000544913 PCDHGB5Q9Y5G0 923 aa6.58□□□□□ -1.36
HMGCS2-204ENST00000544913 PIEZO1Q92508 2521 aa6.58□□□□□ -1.36
HMGCS2-204ENST00000544913 SCN2AQ99250 2005 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 SPTBN2O15020 2390 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 MYO1GB0I1T2 1018 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 CHST10O43529 356 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 B3GALT2O43825 422 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 FGF17O60258 216 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 NOL3O60936 208 aaKnown RBP6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 KCNK5O95279 499 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 SNAP29O95721 258 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 IFNA14P01570 189 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 GSNP06396 782 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 NR2F6P10588 404 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 CCL4P13236 92 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 DRD2P14416 443 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 DNAJA1P31689 397 aaKnown RBP6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 KDELR2P33947 212 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 PTGER1P34995 402 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 MAGEA8P43361 318 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 TPD52P55327 224 aaPredicted RBP6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 ITGA1P56199 1179 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 CXCR4P61073 352 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 CSNK2BP67870 215 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 SIM1P81133 766 aaPredicted RBP6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 SHC2P98077 582 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 TRA2AQ13595 282 aaKnown RBP eCLIP6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 SPIDRQ14159 915 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 GRM7Q14831 915 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 AP1ARQ63HQ0 302 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 PWWP2BQ6NUJ5 590 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 ZNF773Q6PK81 442 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 ZNF621Q6ZSS3 439 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 CBLL1Q75N03 491 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 EIF3MQ7L2H7 374 aaKnown RBP6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 ZC3H7AQ8IWR0 971 aaKnown RBP6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 METTL27Q8N6F8 245 aaPredicted RBP6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 NETO1Q8TDF5 533 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 ANKRD9Q96BM1 317 aaPredicted RBP6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 PPCDCQ96CD2 204 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 RNF31Q96EP0 1072 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 MPP4Q96JB8 637 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 AMDHD1Q96NU7 426 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 NPLQ9BXD5 320 aaPredicted RBP6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 CHST8Q9H2A9 424 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 SYNDIG1Q9H7V2 258 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 CXorf36Q9H7Y0 433 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 TPT1P8Q9HAU6 139 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 SLC24A3Q9HC58 644 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 PRDM9Q9NQV7 894 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 LANCL2Q9NS86 450 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 CUTCQ9NTM9 273 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 FAM118AQ9NWS6 357 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 ADPRHL2Q9NX46 363 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 ETAA1Q9NY74 926 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 HCN3Q9P1Z3 774 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 DHCR7Q9UBM7 475 aaKnown RBP6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 RAPGEFL1Q9UHV5 662 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 FBXW2Q9UKT8 454 aa6.57□□□□□ -1.36
HMGCS2-204ENST00000544913 OR2W5A6NFC9 320 aa6.56□□□□□ -1.36
HMGCS2-204ENST00000544913 URADA6NGE7 173 aa6.56□□□□□ -1.36
HMGCS2-204ENST00000544913 H0YIG0 161 aa6.56□□□□□ -1.36
HMGCS2-204ENST00000544913 H3BSA7 217 aa6.56□□□□□ -1.36
HMGCS2-204ENST00000544913 AGRPO00253 132 aa6.56□□□□□ -1.36
HMGCS2-204ENST00000544913 CNOT3O75175 753 aaKnown RBP6.56□□□□□ -1.36
HMGCS2-204ENST00000544913 JRKO75564 520 aa6.56□□□□□ -1.36
HMGCS2-204ENST00000544913 RFPL3O75679 317 aa6.56□□□□□ -1.36
HMGCS2-204ENST00000544913 OR6B1O95007 311 aa6.56□□□□□ -1.36
HMGCS2-204ENST00000544913 C6orf47O95873 294 aa6.56□□□□□ -1.36
HMGCS2-204ENST00000544913 ONECUT2O95948 504 aa6.56□□□□□ -1.36
HMGCS2-204ENST00000544913 GNAO1P09471 354 aa6.56□□□□□ -1.36
HMGCS2-204ENST00000544913 CCDC159P0C7I6 412 aa6.56□□□□□ -1.36
HMGCS2-204ENST00000544913 ITGAMP11215 1152 aa6.56□□□□□ -1.36
HMGCS2-204ENST00000544913 FGF5P12034 268 aa6.56□□□□□ -1.36
HMGCS2-204ENST00000544913 ZNF28P17035 718 aa6.56□□□□□ -1.36
HMGCS2-204ENST00000544913 RORAP35398 523 aa6.56□□□□□ -1.36
HMGCS2-204ENST00000544913 DCTP40126 519 aa6.56□□□□□ -1.36
HMGCS2-204ENST00000544913 ETV5P41161 510 aa6.56□□□□□ -1.36
HMGCS2-204ENST00000544913 LIMK1P53667 647 aa6.56□□□□□ -1.36
HMGCS2-204ENST00000544913 RAB38P57729 211 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms