RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 ZNF791Q3KP31 576 aaPredicted RBP17.68■□□□□ 0.42
DDX55-211ENST00000544429 ZNF766Q5HY98 468 aa17.68■□□□□ 0.42
DDX55-211ENST00000544429 C6orf163Q5TEZ5 329 aa17.68■□□□□ 0.42
DDX55-211ENST00000544429 R3HCC1LQ7Z5L2 792 aaKnown RBP17.68■□□□□ 0.42
DDX55-211ENST00000544429 HORMAD2Q8N7B1 307 aa17.68■□□□□ 0.42
DDX55-211ENST00000544429 CIDECQ96AQ7 238 aaPredicted RBP17.68■□□□□ 0.42
DDX55-211ENST00000544429 COQ8BQ96D53 544 aa17.68■□□□□ 0.42
DDX55-211ENST00000544429 MAGEB18Q96M61 343 aa17.68■□□□□ 0.42
DDX55-211ENST00000544429 TAAR6Q96RI8 345 aa17.68■□□□□ 0.42
DDX55-211ENST00000544429 HES7Q9BYE0 225 aa17.68■□□□□ 0.42
DDX55-211ENST00000544429 HELZ2Q9BYK8 2649 aaKnown RBP17.68■□□□□ 0.42
DDX55-211ENST00000544429 SH2D2AQ9NP31 389 aa17.68■□□□□ 0.42
DDX55-211ENST00000544429 ACSS1Q9NUB1 689 aaPredicted RBP17.68■□□□□ 0.42
DDX55-211ENST00000544429 MAP10Q9P2G4 905 aa17.68■□□□□ 0.42
DDX55-211ENST00000544429 NUP214P35658 2090 aaPredicted RBP17.68■□□□□ 0.42
DDX55-211ENST00000544429 RELNP78509 3460 aa17.68■□□□□ 0.42
DDX55-211ENST00000544429 C2orf92A0A1B0GVN3 265 aa17.67■□□□□ 0.42
DDX55-211ENST00000544429 PDPK1O15530 556 aa17.67■□□□□ 0.42
DDX55-211ENST00000544429 NME2P1O60361 137 aa17.67■□□□□ 0.42
DDX55-211ENST00000544429 SLC25A12O75746 678 aa17.67■□□□□ 0.42
DDX55-211ENST00000544429 BCAS2O75934 225 aaPredicted RBP17.67■□□□□ 0.42
DDX55-211ENST00000544429 SP1P08047 785 aa17.67■□□□□ 0.42
DDX55-211ENST00000544429 ALDOCP09972 364 aaKnown RBP17.67■□□□□ 0.42
DDX55-211ENST00000544429 KITP10721 976 aa17.67■□□□□ 0.42
DDX55-211ENST00000544429 NME2P22392 152 aa17.67■□□□□ 0.42
DDX55-211ENST00000544429 NTSP30990 170 aa17.67■□□□□ 0.42
DDX55-211ENST00000544429 HPCAL1P37235 193 aa17.67■□□□□ 0.42
DDX55-211ENST00000544429 RPL3P39023 403 aaKnown RBP17.67■□□□□ 0.42
DDX55-211ENST00000544429 NCBP2P52298 156 aaKnown RBP eCLIP17.67■□□□□ 0.423e-7■□□□□ 10.4
DDX55-211ENST00000544429 FOXK1P85037 733 aa17.67■□□□□ 0.42
DDX55-211ENST00000544429 OC90Q02509 493 aaPredicted RBP17.67■□□□□ 0.42
DDX55-211ENST00000544429 MLC1Q15049 377 aa17.67■□□□□ 0.42
DDX55-211ENST00000544429 ZNF324BQ6AW86 544 aaPredicted RBP17.67■□□□□ 0.42
DDX55-211ENST00000544429 CYP4Z2PQ8N1L4 340 aa17.67■□□□□ 0.42
DDX55-211ENST00000544429 OR2L13Q8N349 312 aa17.67■□□□□ 0.42
DDX55-211ENST00000544429 CISD2Q8N5K1 135 aaKnown RBP17.67■□□□□ 0.42
DDX55-211ENST00000544429 TMEM156Q8N614 296 aa17.67■□□□□ 0.42
DDX55-211ENST00000544429 KRTCAP2Q8N6L1 136 aa17.67■□□□□ 0.42
DDX55-211ENST00000544429 OR7A2PQ8NGA2 310 aa17.67■□□□□ 0.42
DDX55-211ENST00000544429 OR52R1Q8NGF1 315 aa17.67■□□□□ 0.42
DDX55-211ENST00000544429 CPT1CQ8TCG5 803 aa17.67■□□□□ 0.42
DDX55-211ENST00000544429 ASB15Q8WXK1 588 aa17.67■□□□□ 0.42
DDX55-211ENST00000544429 KAT2AQ92830 837 aa17.67■□□□□ 0.42
DDX55-211ENST00000544429 WDR55Q9H6Y2 383 aaPredicted RBP17.67■□□□□ 0.42
DDX55-211ENST00000544429 ANKRA2Q9H9E1 313 aa17.67■□□□□ 0.42
DDX55-211ENST00000544429 MED4Q9NPJ6 270 aa17.67■□□□□ 0.42
DDX55-211ENST00000544429 NTMQ9P121 344 aa17.67■□□□□ 0.42
DDX55-211ENST00000544429 CFL2Q9Y281 166 aa17.67■□□□□ 0.42
DDX55-211ENST00000544429 ASPDHA6ND91 283 aa17.66■□□□□ 0.42
DDX55-211ENST00000544429 FBXO45P0C2W1 286 aa17.66■□□□□ 0.42
DDX55-211ENST00000544429 LAMP1P11279 417 aa17.66■□□□□ 0.42
DDX55-211ENST00000544429 CD46P15529 392 aa17.66■□□□□ 0.42
DDX55-211ENST00000544429 EPHA3P29320 983 aa17.66■□□□□ 0.42
DDX55-211ENST00000544429 SLC9B1Q4ZJI4 515 aa17.66■□□□□ 0.42
DDX55-211ENST00000544429 SLC25A25Q6KCM7 469 aa17.66■□□□□ 0.42
DDX55-211ENST00000544429 OPN5Q6U736 354 aa17.66■□□□□ 0.42
DDX55-211ENST00000544429 ZNF551Q7Z340 670 aaPredicted RBP17.66■□□□□ 0.42
DDX55-211ENST00000544429 MDGA2Q7Z553 956 aa17.66■□□□□ 0.42
DDX55-211ENST00000544429 GOLM1Q8NBJ4 401 aa17.66■□□□□ 0.42
DDX55-211ENST00000544429 SLC22A8Q8TCC7 542 aa17.66■□□□□ 0.42
DDX55-211ENST00000544429 ACTRT2Q8TDY3 377 aa17.66■□□□□ 0.42
DDX55-211ENST00000544429 NUDT8Q8WV74 236 aa17.66■□□□□ 0.42
DDX55-211ENST00000544429 ELP4Q96EB1 424 aa17.66■□□□□ 0.42
DDX55-211ENST00000544429 ZBED6CLQ96FA7 236 aaPredicted RBP17.66■□□□□ 0.42
DDX55-211ENST00000544429 VSTM2LQ96N03 204 aa17.66■□□□□ 0.42
DDX55-211ENST00000544429 GAL3ST4Q96RP7 486 aa17.66■□□□□ 0.42
DDX55-211ENST00000544429 ASF1BQ9NVP2 202 aa17.66■□□□□ 0.42
DDX55-211ENST00000544429 SH3BP4Q9P0V3 963 aa17.66■□□□□ 0.42
DDX55-211ENST00000544429 C19orf53Q9UNZ5 99 aaPredicted RBP17.66■□□□□ 0.42
DDX55-211ENST00000544429 A8MVJ9 347 aa17.65■□□□□ 0.42
DDX55-211ENST00000544429 UPK1AO00322 258 aa17.65■□□□□ 0.42
DDX55-211ENST00000544429 MC3RP41968 323 aa17.65■□□□□ 0.42
DDX55-211ENST00000544429 EPGNQ6UW88 154 aa17.65■□□□□ 0.42
DDX55-211ENST00000544429 IL20RBQ6UXL0 311 aa17.65■□□□□ 0.42
DDX55-211ENST00000544429 SPATA19Q7Z5L4 167 aa17.65■□□□□ 0.42
DDX55-211ENST00000544429 DND1Q8IYX4 353 aaKnown RBP17.65■□□□□ 0.42
DDX55-211ENST00000544429 TMEM178AQ8NBL3 297 aa17.65■□□□□ 0.42
DDX55-211ENST00000544429 PSMA8Q8TAA3 256 aa17.65■□□□□ 0.42
DDX55-211ENST00000544429 DYDC1Q8WWB3 177 aa17.65■□□□□ 0.42
DDX55-211ENST00000544429 HOXB13Q92826 284 aaPredicted RBP17.65■□□□□ 0.42
DDX55-211ENST00000544429 SGCZQ96LD1 299 aa17.65■□□□□ 0.42
DDX55-211ENST00000544429 BTBD9Q96Q07 612 aa17.65■□□□□ 0.42
DDX55-211ENST00000544429 ITPAQ9BY32 194 aa17.65■□□□□ 0.42
DDX55-211ENST00000544429 NXF5Q9H1B4 397 aaKnown RBP17.65■□□□□ 0.42
DDX55-211ENST00000544429 AIG1Q9NVV5 245 aa17.65■□□□□ 0.42
DDX55-211ENST00000544429 HPF1Q9NWY4 346 aa17.65■□□□□ 0.42
DDX55-211ENST00000544429 PRODH2Q9UF12 536 aa17.65■□□□□ 0.42
DDX55-211ENST00000544429 BCAP29Q9UHQ4 241 aa17.65■□□□□ 0.42
DDX55-211ENST00000544429 MAPRE3Q9UPY8 281 aa17.65■□□□□ 0.42
DDX55-211ENST00000544429 GPR55Q9Y2T6 319 aaPredicted RBP17.65■□□□□ 0.42
DDX55-211ENST00000544429 COPG1Q9Y678 874 aaKnown RBP17.65■□□□□ 0.42
DDX55-211ENST00000544429 USH1CQ9Y6N9 552 aa17.65■□□□□ 0.42
DDX55-211ENST00000544429 TO15178 435 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 TGDSO95455 350 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 CT45A8P0DMV1 189 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 CT45A9P0DMV2 189 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 DDX5P17844 614 aaKnown RBP17.64■□□□□ 0.41
DDX55-211ENST00000544429 DRD5P21918 477 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 PPICP45877 212 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 NR0B1P51843 470 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms