RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 NPIPA5E9PKD4 350 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 SKAP2O75563 359 aaPredicted RBP8.97□□□□□ -0.97
YBX3-212ENST00000542002 UNC5CO95185 931 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 CHEK2O96017 543 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 CRYABP02511 175 aaKnown RBP8.97□□□□□ -0.97
YBX3-212ENST00000542002 FBXO45P0C2W1 286 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 PIGAP37287 484 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 GSTM5P46439 218 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 SLC18A1P54219 525 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 RPL38P63173 70 aaKnown RBP8.97□□□□□ -0.97
YBX3-212ENST00000542002 HSF1Q00613 529 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 BST1Q10588 318 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 FOXO1Q12778 655 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 TTMPQ5BVD1 217 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 OPN5Q6U736 354 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 SLC29A4Q7RTT9 530 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 FGD2Q7Z6J4 655 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 GPALPP1Q8IXQ4 340 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 PRR22Q8IZ63 422 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 SLC15A4Q8N697 577 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 TMEM178AQ8NBL3 297 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 OR10G3Q8NGC4 313 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 OR5M3Q8NGP4 307 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 PPP1R14CQ8TAE6 165 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 ZNF675Q8TD23 568 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 TP53INP1Q96A56 240 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 TMEM125Q96AQ2 219 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 CIDECQ96AQ7 238 aaPredicted RBP8.97□□□□□ -0.97
YBX3-212ENST00000542002 PPP1R36Q96LQ0 422 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 AMDHD1Q96NU7 426 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 C1orf50Q9BV19 199 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 ITPAQ9BY32 194 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 NXF5Q9H1B4 397 aaKnown RBP8.97□□□□□ -0.97
YBX3-212ENST00000542002 TIMMDC1Q9NPL8 285 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.97□□□□□ -0.976e-8■■□□□ 13.2
YBX3-212ENST00000542002 BCAP29Q9UHQ4 241 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 ERRFI1Q9UJM3 462 aaPredicted RBP8.97□□□□□ -0.97
YBX3-212ENST00000542002 HAO1Q9UJM8 370 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 NPIPA1Q9UND3 350 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 OSGIN2Q9Y236 505 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.97□□□□□ -0.97
YBX3-212ENST00000542002 WBP11Q9Y2W2 641 aaKnown RBP8.97□□□□□ -0.97
YBX3-212ENST00000542002 RAP2CQ9Y3L5 183 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 CHCHD2Q9Y6H1 151 aaPredicted RBP8.97□□□□□ -0.97
YBX3-212ENST00000542002 FLNCQ14315 2725 aa8.97□□□□□ -0.97
YBX3-212ENST00000542002 ASNA1O43681 348 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 PLOD3O60568 738 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 SNNO75324 88 aaPredicted RBP8.96□□□□□ -0.98
YBX3-212ENST00000542002 SASH3O75995 380 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 GLSO94925 669 aaPredicted RBP8.96□□□□□ -0.98
YBX3-212ENST00000542002 ABCB1P08183 1280 aaPredicted RBP8.96□□□□□ -0.98
YBX3-212ENST00000542002 CT45A8P0DMV1 189 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 CT45A9P0DMV2 189 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 NEFHP12036 1026 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 EFNA1P20827 205 aaPredicted RBP8.96□□□□□ -0.98
YBX3-212ENST00000542002 CNR1P21554 472 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 GRK2P25098 689 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 MPIP34949 423 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 DNASE1L1P49184 302 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 RPL14P50914 215 aaKnown RBP8.96□□□□□ -0.98
YBX3-212ENST00000542002 NCBP2P52298 156 aaKnown RBP eCLIP8.96□□□□□ -0.98
YBX3-212ENST00000542002 FBXW4P57775 412 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 ALDH6A1Q02252 535 aaKnown RBP8.96□□□□□ -0.98
YBX3-212ENST00000542002 PDE7AQ13946 482 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 PTGR1Q14914 329 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 PDCD2Q16342 344 aaPredicted RBP8.96□□□□□ -0.98
YBX3-212ENST00000542002 NNATQ16517 81 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 NTRK2Q16620 822 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 CT45A2Q5DJT8 189 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 CMPK2Q5EBM0 449 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 AGBL2Q5U5Z8 902 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 HHATQ5VTY9 493 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 IL23RQ5VWK5 629 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 BICRALQ6AI39 1079 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 RTL4Q6ZR62 310 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 IKBIPQ70UQ0 350 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 ZNF551Q7Z340 670 aaPredicted RBP8.96□□□□□ -0.98
YBX3-212ENST00000542002 LIX1Q8N485 282 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 FAM26EQ8N5C1 309 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 KRTCAP2Q8N6L1 136 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 ZFP62Q8NB50 900 aaPredicted RBP8.96□□□□□ -0.98
YBX3-212ENST00000542002 OR2M7Q8NG81 312 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 OR4N2Q8NGD1 307 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 OR52N2Q8NGI0 321 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 PAQR8Q8TEZ7 354 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 NTNG2Q96CW9 530 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 SPACA9Q96E40 222 aaPredicted RBP8.96□□□□□ -0.98
YBX3-212ENST00000542002 SGCZQ96LD1 299 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 BBS4Q96RK4 519 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 CCT7Q99832 543 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 SH3GL2Q99962 352 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 REEP4Q9H6H4 257 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 AKTIPQ9H8T0 292 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 PFDN4Q9NQP4 134 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 SEC14L3Q9UDX4 400 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 CNOT11Q9UKZ1 510 aaKnown RBP8.96□□□□□ -0.98
YBX3-212ENST00000542002 GPR55Q9Y2T6 319 aaPredicted RBP8.96□□□□□ -0.98
YBX3-212ENST00000542002 KLF13Q9Y2Y9 288 aaPredicted RBP8.96□□□□□ -0.98
YBX3-212ENST00000542002 TMED5Q9Y3A6 229 aa8.96□□□□□ -0.98
YBX3-212ENST00000542002 HRH3Q9Y5N1 445 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms