RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 CASP8Q14790 479 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 CHI3L2Q15782 390 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 PRSS53Q2L4Q9 553 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 RFTN2Q52LD8 501 aaPredicted RBP12.09□□□□□ -0.47
LTBR-208ENST00000541005 FAM180BQ6P0A1 224 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 GFRALQ6UXV0 394 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 TICAM1Q8IUC6 712 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 DDIASQ8IXT1 998 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 FAM9CQ8IZT9 166 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 ADCY4Q8NFM4 1077 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 OR2M7Q8NG81 312 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 OR9A2Q8NGT5 310 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 PPP1R14CQ8TAE6 165 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 PAQR8Q8TEZ7 354 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 PPP3R2Q96LZ3 170 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 TMBIM4Q9HC24 238 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 SACM1LQ9NTJ5 587 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 ZDHHC2Q9UIJ5 367 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 SLC5A6Q9Y289 635 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 DTX4Q9Y2E6 619 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.09□□□□□ -0.47
LTBR-208ENST00000541005 TMEM120BA0PK00 339 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 WIPF3A6NGB9 483 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 ACOX3O15254 700 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 AGFG2O95081 481 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 UNC5CO95185 931 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 HSPA4LO95757 839 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 CCL3P10147 92 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 MPIP34949 423 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 PTGER1P34995 402 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 ASMTP46597 345 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 TMED10P49755 219 aaKnown RBP12.08□□□□□ -0.48
LTBR-208ENST00000541005 EMDP50402 254 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 NR0B1P51843 470 aaKnown RBP12.08□□□□□ -0.48
LTBR-208ENST00000541005 GPR85P60893 370 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 ABCE1P61221 599 aaKnown RBP12.08□□□□□ -0.48
LTBR-208ENST00000541005 RPL38P63173 70 aaKnown RBP12.08□□□□□ -0.48
LTBR-208ENST00000541005 MRPS35P82673 323 aaKnown RBP12.08□□□□□ -0.48
LTBR-208ENST00000541005 PDE7AQ13946 482 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 EXOSC7Q15024 291 aaKnown RBP12.08□□□□□ -0.48
LTBR-208ENST00000541005 HYAL4Q2M3T9 481 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 C4orf17Q53FE4 359 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 TRMT12Q53H54 448 aaKnown RBP12.08□□□□□ -0.48
LTBR-208ENST00000541005 HLA-DQA1Q5Y7H0 255 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 RGS9BPQ6ZS82 235 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 GK5Q6ZS86 529 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 CCDC116Q8IYX3 515 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 KIRREL3Q8IZU9 778 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 FBXW8Q8N3Y1 598 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 OR10G3Q8NGC4 313 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 OR52R1Q8NGF1 315 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 CDC26Q8NHZ8 85 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 AGR3Q8TD06 166 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 EGLN2Q96KS0 407 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 BTBD9Q96Q07 612 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 SORT1Q99523 831 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 FAM173AQ9BQD7 235 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 NXF5Q9H1B4 397 aaKnown RBP12.08□□□□□ -0.48
LTBR-208ENST00000541005 KCNK9Q9NPC2 374 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 PFDN4Q9NQP4 134 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 CNIH4Q9P003 139 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 PRODH2Q9UF12 536 aa12.08□□□□□ -0.48
LTBR-208ENST00000541005 ERRFI1Q9UJM3 462 aaPredicted RBP12.08□□□□□ -0.48
LTBR-208ENST00000541005 CHCHD2Q9Y6H1 151 aaPredicted RBP12.08□□□□□ -0.48
LTBR-208ENST00000541005 A0A087WV62 115 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 WDR91A4D1P6 747 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 PINLYPA6NC86 204 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 ANKRD33BA6NCL7 494 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 CAPN14A8MX76 684 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 NPIPA5E9PKD4 350 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 TFECO14948 347 aaPredicted RBP12.07□□□□□ -0.48
LTBR-208ENST00000541005 TO15178 435 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 ITM2AO43736 263 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 LYPLA1O75608 230 aaPredicted RBP12.07□□□□□ -0.48
LTBR-208ENST00000541005 WISP2O76076 250 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 GLSO94925 669 aaPredicted RBP12.07□□□□□ -0.48
LTBR-208ENST00000541005 LDLRP01130 860 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 P04436 131 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 BCKDHAP12694 445 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 NAGAP17050 411 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 CNR1P21554 472 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 MAPK1P28482 360 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 NTSP30990 170 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 NRG3P56975 720 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 WDR4P57081 412 aaKnown RBP12.07□□□□□ -0.48
LTBR-208ENST00000541005 DCAF7P61962 342 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 PSPHP78330 225 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 FOXO1Q12778 655 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 RPS6KA2Q15349 733 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 GALNTL6Q49A17 601 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 ATP6AP1LQ52LC2 224 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 SLC22A10Q63ZE4 541 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 Q6ZPB1 254 aaPredicted RBP12.07□□□□□ -0.48
LTBR-208ENST00000541005 CHERPQ8IWX8 916 aaKnown RBP12.07□□□□□ -0.48
LTBR-208ENST00000541005 SIMC1Q8NDZ2 872 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 SSC4DQ8WTU2 575 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 RELTQ969Z4 430 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 MTERF3Q96E29 417 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 HSPBAP1Q96EW2 488 aa12.07□□□□□ -0.48
LTBR-208ENST00000541005 LCORQ96JN0 433 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms