RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 RFX4Q33E94 735 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 PPP4R4Q6NUP7 873 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 DUS1LQ6P1R4 473 aaKnown RBP7.86□□□□□ -1.15
CHD4-208ENST00000540960 CYP2R1Q6VVX0 501 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 PATL1Q86TB9 770 aaKnown RBP7.86□□□□□ -1.15
CHD4-208ENST00000540960 ZC3H7AQ8IWR0 971 aaKnown RBP7.86□□□□□ -1.15
CHD4-208ENST00000540960 ADGRG5Q8IZF4 528 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 FAM156AQ8NDB6 213 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 OR7A2PQ8NGA2 310 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 OR4E2Q8NGC2 313 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 OR6C4Q8NGE1 309 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 OR52N2Q8NGI0 321 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 OR10A6Q8NH74 314 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 ADAMTS18Q8TE60 1221 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 CANT1Q8WVQ1 401 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 FIG4Q92562 907 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 FKBP10Q96AY3 582 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 C14orf79Q96F83 325 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 SERINC2Q96SA4 455 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 CD180Q99467 661 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 SPATA5L1Q9BVQ7 753 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 NUDT9Q9BW91 350 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 CHID1Q9BWS9 393 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 TMEM168Q9H0V1 697 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 CXXC4Q9H2H0 198 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 TMEM38AQ9H6F2 299 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 AGPAT4Q9NRZ5 378 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 DCAF13Q9NV06 445 aaKnown RBP7.86□□□□□ -1.15
CHD4-208ENST00000540960 ACTR10Q9NZ32 417 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 ZNF624Q9P2J8 865 aaPredicted RBP7.86□□□□□ -1.15
CHD4-208ENST00000540960 DNAJB9Q9UBS3 223 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 CIDEBQ9UHD4 219 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 EGFL7Q9UHF1 273 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 SCOCQ9UIL1 159 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 RIMS3Q9UJD0 308 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 PACSIN3Q9UKS6 424 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 FAF1Q9UNN5 650 aaPredicted RBP7.86□□□□□ -1.15
CHD4-208ENST00000540960 TMEM184BQ9Y519 407 aaPredicted RBP7.86□□□□□ -1.15
CHD4-208ENST00000540960 ORC6Q9Y5N6 252 aa7.86□□□□□ -1.15
CHD4-208ENST00000540960 AKAP6Q13023 2319 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 VPS13CQ709C8 3753 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 A0A0J9YY10 115 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 RNF103-CHMP3A0A140T963 221 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 OR2A25A4D2G3 310 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 LILRA5A6NI73 299 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 ARGFXA6NJG6 315 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 B4E171 279 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 C9JVG2 144 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 PLPP1O14494 284 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 GNGT2O14610 69 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 CLOCKO15516 846 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 B3GALT2O43825 422 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 SRPX2O60687 465 aaPredicted RBP7.85□□□□□ -1.15
CHD4-208ENST00000540960 SCN2BO60939 215 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 ETHE1O95571 254 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 HPRP00739 348 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 SERPIND1P05546 499 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 IL3P08700 152 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 FAM58BPP0C7Q3 252 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 FOSL1P15407 271 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 PNLIPP16233 465 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 ZNF28P17035 718 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 CDH2P19022 906 aaPredicted RBP7.85□□□□□ -1.15
CHD4-208ENST00000540960 ATP6V1B2P21281 511 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 HIST1H1TP22492 207 aaPredicted RBP7.85□□□□□ -1.15
CHD4-208ENST00000540960 TPP2P29144 1249 aaPredicted RBP7.85□□□□□ -1.15
CHD4-208ENST00000540960 ALDH4A1P30038 563 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 PPP2R1BP30154 601 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 CSF2RBP32927 897 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 PCGF2P35227 344 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 MSX2P35548 267 aaPredicted RBP7.85□□□□□ -1.15
CHD4-208ENST00000540960 TSPAN7P41732 249 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 FASLGP48023 281 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 EPHA4P54764 986 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 MANFP55145 182 aaKnown RBP7.85□□□□□ -1.15
CHD4-208ENST00000540960 WNT3P56703 355 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 BIKQ13323 160 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 TP53BP2Q13625 1128 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 NDUFA9Q16795 377 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 SPDYE7PQ495Y7 208 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 GCNT6Q5T4J0 391 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 ABHD17CQ6PCB6 329 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 OGFOD3Q6PK18 319 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 TMEM64Q6YI46 380 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 TMEM26Q6ZUK4 368 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 PAQR7Q86WK9 346 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 ZDHHC13Q8IUH4 622 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 PHC2Q8IXK0 858 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 ADGRF3Q8IZF5 1079 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 DTWD1Q8N5C7 304 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 C2orf73Q8N5S3 287 aaPredicted RBP7.85□□□□□ -1.15
CHD4-208ENST00000540960 FAM46DQ8NEK8 389 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 FDCSPQ8NFU4 85 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 SFXN5Q8TD22 340 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 CREB3L4Q8TEY5 395 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 ZDHHC1Q8WTX9 485 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 NRG4Q8WWG1 115 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 GFM2Q969S9 779 aaKnown RBP7.85□□□□□ -1.15
CHD4-208ENST00000540960 TBC1D20Q96BZ9 403 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 TM4SF18Q96CE8 201 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms