RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 C1orf189Q5VU69 101 aa22.96■■□□□ 1.27
TTC3-225ENST00000540756 MFSD12Q6NUT3 480 aa22.96■■□□□ 1.27
TTC3-225ENST00000540756 GPR135Q8IZ08 494 aa22.96■■□□□ 1.27
TTC3-225ENST00000540756 SPPL2AQ8TCT8 520 aa22.96■■□□□ 1.27
TTC3-225ENST00000540756 SLC35A4Q96G79 324 aa22.96■■□□□ 1.27
TTC3-225ENST00000540756 ZNF597Q96LX8 424 aa22.96■■□□□ 1.27
TTC3-225ENST00000540756 CCDC74BQ96LY2 380 aa22.96■■□□□ 1.27
TTC3-225ENST00000540756 YIPF2Q9BWQ6 316 aa22.96■■□□□ 1.27
TTC3-225ENST00000540756 ADAP2Q9NPF8 381 aa22.96■■□□□ 1.27
TTC3-225ENST00000540756 PDP2Q9P2J9 529 aa22.96■■□□□ 1.27
TTC3-225ENST00000540756 ZNF639Q9UID6 485 aa22.96■■□□□ 1.27
TTC3-225ENST00000540756 SERTAD3Q9UJW9 196 aa22.96■■□□□ 1.27
TTC3-225ENST00000540756 LRCH1Q9Y2L9 728 aa22.96■■□□□ 1.27
TTC3-225ENST00000540756 KHNYNO15037 678 aaKnown RBP22.96■■□□□ 1.27
TTC3-225ENST00000540756 EMP3P54852 163 aa22.96■■□□□ 1.27
TTC3-225ENST00000540756 C9orf16Q9BUW7 83 aa22.96■■□□□ 1.27
TTC3-225ENST00000540756 ACTRT3Q9BYD9 372 aa22.96■■□□□ 1.27
TTC3-225ENST00000540756 PRTFDC1Q9NRG1 225 aa22.96■■□□□ 1.27
TTC3-225ENST00000540756 ENAMQ9NRM1 1142 aa22.96■■□□□ 1.27
TTC3-225ENST00000540756 ZNF318Q5VUA4 2279 aa22.95■■□□□ 1.26
TTC3-225ENST00000540756 HRKO00198 91 aa22.95■■□□□ 1.26
TTC3-225ENST00000540756 TOX3O15405 576 aaPredicted RBP22.95■■□□□ 1.26
TTC3-225ENST00000540756 CTNSO60931 367 aa22.95■■□□□ 1.26
TTC3-225ENST00000540756 RASAL1O95294 804 aa22.95■■□□□ 1.26
TTC3-225ENST00000540756 RECKO95980 971 aa22.95■■□□□ 1.26
TTC3-225ENST00000540756 LAPTM4AQ15012 233 aa22.95■■□□□ 1.26
TTC3-225ENST00000540756 CMPK2Q5EBM0 449 aa22.95■■□□□ 1.26
TTC3-225ENST00000540756 TLDC1Q6P9B6 456 aa22.95■■□□□ 1.26
TTC3-225ENST00000540756 LGI4Q8N135 537 aa22.95■■□□□ 1.26
TTC3-225ENST00000540756 MS4A4EQ96PG1 132 aa22.95■■□□□ 1.26
TTC3-225ENST00000540756 BARD1Q99728 777 aaKnown RBP22.95■■□□□ 1.26
TTC3-225ENST00000540756 ALOXE3Q9BYJ1 711 aa22.95■■□□□ 1.26
TTC3-225ENST00000540756 QRSL1Q9H0R6 528 aaKnown RBP22.95■■□□□ 1.26
TTC3-225ENST00000540756 VCXQ9H320 206 aa22.95■■□□□ 1.26
TTC3-225ENST00000540756 PTGFRNQ9P2B2 879 aa22.95■■□□□ 1.26
TTC3-225ENST00000540756 C19orf53Q9UNZ5 99 aaPredicted RBP22.95■■□□□ 1.26
TTC3-225ENST00000540756 SH3GLB1Q9Y371 365 aa22.95■■□□□ 1.26
TTC3-225ENST00000540756 MFN2O95140 757 aa22.94■■□□□ 1.26
TTC3-225ENST00000540756 MSL3P1P0C860 447 aa22.94■■□□□ 1.26
TTC3-225ENST00000540756 SLC35E2P0CK97 266 aa22.94■■□□□ 1.26
TTC3-225ENST00000540756 YAP1P46937 504 aaKnown RBP22.94■■□□□ 1.26
TTC3-225ENST00000540756 STX4Q12846 297 aa22.94■■□□□ 1.26
TTC3-225ENST00000540756 NIPAL1Q6NVV3 410 aa22.94■■□□□ 1.26
TTC3-225ENST00000540756 PATL1Q86TB9 770 aaKnown RBP22.94■■□□□ 1.26
TTC3-225ENST00000540756 ZNF595Q8IYB9 648 aa22.94■■□□□ 1.26
TTC3-225ENST00000540756 MAGEE2Q8TD90 523 aaPredicted RBP22.94■■□□□ 1.26
TTC3-225ENST00000540756 SLC9A6Q92581 669 aa22.94■■□□□ 1.26
TTC3-225ENST00000540756 COL21A1Q96P44 957 aa22.94■■□□□ 1.26
TTC3-225ENST00000540756 NDC1Q9BTX1 674 aa22.94■■□□□ 1.26
TTC3-225ENST00000540756 PCDHGB5Q9Y5G0 923 aa22.94■■□□□ 1.26
TTC3-225ENST00000540756 AP4B1Q9Y6B7 739 aa22.94■■□□□ 1.26
TTC3-225ENST00000540756 OR10H2O60403 315 aa22.94■■□□□ 1.26
TTC3-225ENST00000540756 TIAF1O95411 115 aa22.94■■□□□ 1.26
TTC3-225ENST00000540756 PRKACGP22612 351 aa22.94■■□□□ 1.26
TTC3-225ENST00000540756 DUSP8Q13202 625 aa22.94■■□□□ 1.26
TTC3-225ENST00000540756 GK3PQ14409 553 aa22.94■■□□□ 1.26
TTC3-225ENST00000540756 PLA2G2CQ5R387 149 aa22.94■■□□□ 1.26
TTC3-225ENST00000540756 SLC30A8Q8IWU4 369 aa22.94■■□□□ 1.26
TTC3-225ENST00000540756 GPR32P1Q8NGA4 272 aa22.94■■□□□ 1.26
TTC3-225ENST00000540756 CDS1Q92903 461 aa22.94■■□□□ 1.26
TTC3-225ENST00000540756 POP5Q969H6 163 aaKnown RBP22.94■■□□□ 1.26
TTC3-225ENST00000540756 CTHRC1Q96CG8 243 aa22.94■■□□□ 1.26
TTC3-225ENST00000540756 BTBD9Q96Q07 612 aa22.94■■□□□ 1.26
TTC3-225ENST00000540756 OR6C1Q96RD1 312 aa22.94■■□□□ 1.26
TTC3-225ENST00000540756 WFDC6Q9BQY6 131 aa22.94■■□□□ 1.26
TTC3-225ENST00000540756 NECTIN3Q9NQS3 549 aa22.94■■□□□ 1.26
TTC3-225ENST00000540756 PLOD3O60568 738 aa22.93■■□□□ 1.26
TTC3-225ENST00000540756 ANKRD34CP0C6C1 535 aa22.93■■□□□ 1.26
TTC3-225ENST00000540756 CD247P20963 164 aa22.93■■□□□ 1.26
TTC3-225ENST00000540756 GPAT3Q53EU6 434 aa22.93■■□□□ 1.26
TTC3-225ENST00000540756 STK32CQ86UX6 486 aa22.93■■□□□ 1.26
TTC3-225ENST00000540756 COMTD1Q86VU5 262 aa22.93■■□□□ 1.26
TTC3-225ENST00000540756 ZG16BQ96DA0 208 aa22.93■■□□□ 1.26
TTC3-225ENST00000540756 LANCL2Q9NS86 450 aa22.93■■□□□ 1.26
TTC3-225ENST00000540756 DNAAF2Q9NVR5 837 aaKnown RBP22.93■■□□□ 1.26
TTC3-225ENST00000540756 THUMPD1Q9NXG2 353 aaKnown RBP22.93■■□□□ 1.26
TTC3-225ENST00000540756 NDUFAF4Q9P032 175 aa22.93■■□□□ 1.26
TTC3-225ENST00000540756 MRPS33Q9Y291 106 aaKnown RBP22.93■■□□□ 1.26
TTC3-225ENST00000540756 G3V2T6 193 aa22.92■■□□□ 1.26
TTC3-225ENST00000540756 GDF9O60383 454 aa22.92■■□□□ 1.26
TTC3-225ENST00000540756 ZIC2O95409 532 aaPredicted RBP22.92■■□□□ 1.26
TTC3-225ENST00000540756 H6PDO95479 791 aa22.92■■□□□ 1.26
TTC3-225ENST00000540756 ACP2P11117 423 aa22.92■■□□□ 1.26
TTC3-225ENST00000540756 FUT4P22083 530 aa22.92■■□□□ 1.26
TTC3-225ENST00000540756 DCTP40126 519 aa22.92■■□□□ 1.26
TTC3-225ENST00000540756 EFNA3P52797 238 aa22.92■■□□□ 1.26
TTC3-225ENST00000540756 PUM1Q14671 1186 aaKnown RBP eCLIP22.92■■□□□ 1.26
TTC3-225ENST00000540756 DUSP5Q16690 384 aa22.92■■□□□ 1.26
TTC3-225ENST00000540756 OR2T5Q6IEZ7 315 aa22.92■■□□□ 1.26
TTC3-225ENST00000540756 B3GNT8Q7Z7M8 397 aa22.92■■□□□ 1.26
TTC3-225ENST00000540756 OR2T29Q8NH02 315 aa22.92■■□□□ 1.26
TTC3-225ENST00000540756 ZNF675Q8TD23 568 aa22.92■■□□□ 1.26
TTC3-225ENST00000540756 DPYSL5Q9BPU6 564 aa22.92■■□□□ 1.26
TTC3-225ENST00000540756 CXorf21Q9HAI6 301 aa22.92■■□□□ 1.26
TTC3-225ENST00000540756 SMURF2Q9HAU4 748 aa22.92■■□□□ 1.26
TTC3-225ENST00000540756 TMEM247A6NEH6 219 aa22.92■■□□□ 1.26
TTC3-225ENST00000540756 CLDN4O14493 209 aa22.92■■□□□ 1.26
TTC3-225ENST00000540756 CBX7O95931 251 aa22.92■■□□□ 1.26
TTC3-225ENST00000540756 S1PR1P21453 382 aa22.92■■□□□ 1.26
TTC3-225ENST00000540756 FOXL2P58012 376 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms