RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 SPON2Q9BUD6 331 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 ZNF385DQ9H6B1 395 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 NANOGQ9H9S0 305 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 HHATLQ9HCP6 504 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 CSNK1G3Q9Y6M4 447 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 ZFP37Q9Y6Q3 630 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-214ENST00000540109 CXCR6O00574 342 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 PRRG1O14668 218 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 GABARAPO95166 117 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 GTF2F2P13984 249 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 VAMP1P23763 118 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 CALCRP30988 508 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 SERPINF1P36955 418 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 HSPA7P48741 367 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 IRF9Q00978 393 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 SPOUT1Q5T280 376 aaKnown RBP5.77□□□□□ -1.49
PTPRD-214ENST00000540109 ARHGAP11AQ6P4F7 1023 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 GAREM2Q75VX8 874 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 MARCH9Q86YJ5 346 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 LYSMD2Q8IV50 215 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 ISG20Q96AZ6 181 aaKnown RBP5.77□□□□□ -1.49
PTPRD-214ENST00000540109 TMED9Q9BVK6 235 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 TRPV4Q9HBA0 871 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 EVA1BQ9NVM1 165 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 MRPL42Q9Y6G3 142 aaKnown RBP5.77□□□□□ -1.49
PTPRD-214ENST00000540109 A0A096LPI6 279 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 LOC102723532A0A0G2JNH3 316 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 A0A1B0GTW7 788 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 A0A1W2PQ09 198 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 STC2O76061 302 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 IFNA21P01568 189 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 H2AFB2P0C5Z0 115 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 GLULP15104 373 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 HDCP19113 662 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 GABRB3P28472 473 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 MAT2AP31153 395 aaKnown RBP5.77□□□□□ -1.49
PTPRD-214ENST00000540109 CPOXP36551 454 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 KIR3DL1P43629 444 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 MEOX2P50222 304 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 RHOAP61586 193 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 ACTC1P68032 377 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 ACTA1P68133 377 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 GPLD1P80108 840 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 SLC7A9P82251 487 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 FBXO48Q5FWF7 155 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 NADSYN1Q6IA69 706 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 NUDT18Q6ZVK8 323 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 TAAR8Q969N4 342 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 ZNF778Q96MU6 729 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 ELF4Q99607 663 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-214ENST00000540109 ABCG5Q9H222 651 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 SLC38A1Q9H2H9 487 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 EXTL2Q9UBQ6 330 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 LOC105369274A0A096LPK9 316 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 PRSS51A0A1B0GVH4 220 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 hCG_1807616A0A1W2PRN6 198 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 LGALS8O00214 317 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 PSMD9O00233 223 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 SLC1A7O00341 560 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 FABP7O15540 132 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 LYRM1O43325 122 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 B4GALT3O60512 393 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 AOC2O75106 756 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 SIX6O95475 246 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 RAB36O95755 333 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 CBSLP0DN79 551 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 COX7A2P14406 83 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 AGXTP21549 392 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 IGFBP6P24592 240 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-214ENST00000540109 CBSP35520 551 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 GRM7Q14831 915 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 NFATC4Q14934 902 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 SEC23BQ15437 767 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 ARMC12Q5T9G4 340 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 CD276Q5ZPR3 534 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 SLC39A5Q6ZMH5 540 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 OR4N4Q8N0Y3 316 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 AVL9Q8NBF6 648 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 SEMA6DQ8NFY4 1073 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 THAP3Q8WTV1 239 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-214ENST00000540109 CDKN2AIPNLQ96HQ2 116 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 TMEM74Q96NL1 305 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 IL4I1Q96RQ9 567 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 TRIM36Q9NQ86 728 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 ABCD2Q9UBJ2 740 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-214ENST00000540109 C7orf72A4D263 438 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 AGAP14A8MT82 685 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 COCHO43405 550 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 LATO43561 262 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 DIRAS1O95057 198 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 GOT2P00505 430 aaKnown RBP5.77□□□□□ -1.49
PTPRD-214ENST00000540109 PKMP14618 531 aaKnown RBP5.77□□□□□ -1.49
PTPRD-214ENST00000540109 CD1DP15813 335 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 SLC6A2P23975 617 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 PITPNBP48739 271 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 RABGGTBP53611 331 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 RAG2P55895 527 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 RIN1Q13671 783 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 NTRK2Q16620 822 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms