RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 RNF111Q6ZNA4 994 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 Q6ZPB1 254 aaPredicted RBP16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 SPPL2CQ8IUH8 684 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 GHDCQ8N2G8 530 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 OR4K14Q8NGD5 310 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 CHTF18Q8WVB6 975 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 CCDC134Q9H6E4 229 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 TINAGQ9UJW2 476 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 PHF3Q92576 2039 aaKnown RBP16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 ITPR2Q14571 2701 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 C1orf226A1L170 272 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 TRPC5OSA6NMA1 111 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 CCL21O00585 134 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 PRPH2P23942 346 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 SSTR4P31391 388 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 PTGER1P34995 402 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 XKP51811 444 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 EBPQ15125 230 aaKnown RBP16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 XKR7Q5GH72 579 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 SLC48A1Q6P1K1 146 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 RTL4Q6ZR62 310 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 Q6ZSR9 355 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 WDR75Q8IWA0 830 aaKnown RBP16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 GOLM1Q8NBJ4 401 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 CCDC120Q96HB5 630 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 METTL2AQ96IZ6 378 aaKnown RBP16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 MAGED4Q96JG8 741 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 SGCZQ96LD1 299 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 NUF2Q9BZD4 464 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 WWTR1Q9GZV5 400 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 CCL27Q9Y4X3 112 aa16.5■□□□□ 0.23
TNFRSF1A-209ENST00000536717 NOTCH2Q04721 2471 aa16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 PKDREJQ9NTG1 2253 aa16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 NPIPB8E9PQR5 432 aa16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 TFECO14948 347 aaPredicted RBP16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 GUCY1B2O75343 617 aa16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 SEC22BO75396 215 aa16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 CCL3P10147 92 aa16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 CPMP14384 443 aa16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 RAE1P78406 368 aaKnown RBP16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 FUT7Q11130 342 aa16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 ZNF791Q3KP31 576 aaPredicted RBP16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 CMPK2Q5EBM0 449 aa16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 SLC29A4Q7RTT9 530 aa16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 FGD2Q7Z6J4 655 aa16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 GALNT12Q8IXK2 581 aa16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 OR2M7Q8NG81 312 aa16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 OR52N2Q8NGI0 321 aa16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 OR2T11Q8NH01 316 aa16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 TUBGCP3Q96CW5 907 aa16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 APIPQ96GX9 242 aa16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 PPP1R36Q96LQ0 422 aa16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 PPP3R2Q96LZ3 170 aa16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 GAL3ST4Q96RP7 486 aa16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 LRTM1Q9HBL6 345 aa16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 C1orf109Q9NX04 203 aa16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 MCM8Q9UJA3 840 aa16.49■□□□□ 0.23
TNFRSF1A-209ENST00000536717 ATP6AP2A0A1C7CYW4 349 aa16.48■□□□□ 0.23
TNFRSF1A-209ENST00000536717 OR6C76A6NM76 312 aa16.48■□□□□ 0.23
TNFRSF1A-209ENST00000536717 G3V3Y1 287 aa16.48■□□□□ 0.23
TNFRSF1A-209ENST00000536717 EDF1O60869 148 aaKnown RBP16.48■□□□□ 0.23
TNFRSF1A-209ENST00000536717 ATP6AP2O75787 350 aa16.48■□□□□ 0.23
TNFRSF1A-209ENST00000536717 JUNP05412 331 aaKnown RBP16.48■□□□□ 0.23
TNFRSF1A-209ENST00000536717 NR0B1P51843 470 aaKnown RBP16.48■□□□□ 0.23
TNFRSF1A-209ENST00000536717 TRA2BP62995 288 aaKnown RBP16.48■□□□□ 0.23
TNFRSF1A-209ENST00000536717 GALNTL6Q49A17 601 aa16.48■□□□□ 0.23
TNFRSF1A-209ENST00000536717 ATP6AP1LQ52LC2 224 aa16.48■□□□□ 0.23
TNFRSF1A-209ENST00000536717 BNC2Q6ZN30 1099 aaPredicted RBP16.48■□□□□ 0.23
TNFRSF1A-209ENST00000536717 SLC15A4Q8N697 577 aa16.48■□□□□ 0.23
TNFRSF1A-209ENST00000536717 ZNF441Q8N8Z8 693 aa16.48■□□□□ 0.23
TNFRSF1A-209ENST00000536717 SLC22A8Q8TCC7 542 aa16.48■□□□□ 0.23
TNFRSF1A-209ENST00000536717 C11orf24Q96F05 449 aaPredicted RBP16.48■□□□□ 0.23
TNFRSF1A-209ENST00000536717 C3orf30Q96M34 536 aa16.48■□□□□ 0.23
TNFRSF1A-209ENST00000536717 SH2D2AQ9NP31 389 aa16.48■□□□□ 0.23
TNFRSF1A-209ENST00000536717 PLSCR2Q9NRY7 297 aa16.48■□□□□ 0.23
TNFRSF1A-209ENST00000536717 FAM53CQ9NYF3 392 aa16.48■□□□□ 0.23
TNFRSF1A-209ENST00000536717 HEY2Q9UBP5 337 aa16.48■□□□□ 0.23
TNFRSF1A-209ENST00000536717 LSM1O15116 133 aaKnown RBP16.47■□□□□ 0.23
TNFRSF1A-209ENST00000536717 PCDH7O60245 1069 aa16.47■□□□□ 0.23
TNFRSF1A-209ENST00000536717 VIMP08670 466 aaKnown RBP16.47■□□□□ 0.23
TNFRSF1A-209ENST00000536717 PORP16435 677 aaPredicted RBP16.47■□□□□ 0.23
TNFRSF1A-209ENST00000536717 S1PR1P21453 382 aa16.47■□□□□ 0.23
TNFRSF1A-209ENST00000536717 CNR1P21554 472 aa16.47■□□□□ 0.23
TNFRSF1A-209ENST00000536717 DUSP2Q05923 314 aa16.47■□□□□ 0.23
TNFRSF1A-209ENST00000536717 ZNF615Q8N8J6 731 aa16.47■□□□□ 0.23
TNFRSF1A-209ENST00000536717 ITLN2Q8WWU7 325 aaPredicted RBP16.47■□□□□ 0.23
TNFRSF1A-209ENST00000536717 SPACA9Q96E40 222 aaPredicted RBP16.47■□□□□ 0.23
TNFRSF1A-209ENST00000536717 TTTY12Q9BZ98 90 aa16.47■□□□□ 0.23
TNFRSF1A-209ENST00000536717 MEAF6Q9HAF1 191 aa16.47■□□□□ 0.23
TNFRSF1A-209ENST00000536717 SACM1LQ9NTJ5 587 aa16.47■□□□□ 0.23
TNFRSF1A-209ENST00000536717 SIRT5Q9NXA8 310 aa16.47■□□□□ 0.23
TNFRSF1A-209ENST00000536717 TMED5Q9Y3A6 229 aa16.47■□□□□ 0.23
TNFRSF1A-209ENST00000536717 USH1CQ9Y6N9 552 aa16.47■□□□□ 0.23
TNFRSF1A-209ENST00000536717 GNG14A0A1W2PPG7 69 aa16.46■□□□□ 0.23
TNFRSF1A-209ENST00000536717 POLR3GO15318 223 aaPredicted RBP16.46■□□□□ 0.23
TNFRSF1A-209ENST00000536717 PEX11AO75192 247 aa16.46■□□□□ 0.23
TNFRSF1A-209ENST00000536717 ERAL1O75616 437 aaKnown RBP16.46■□□□□ 0.23
TNFRSF1A-209ENST00000536717 ABOP16442 354 aa16.46■□□□□ 0.23
TNFRSF1A-209ENST00000536717 NT5EP21589 574 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms