RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 TMBIM6P55061 237 aa26.74■■□□□ 1.87
SAMD1-202ENST00000533683 FGD3Q5JSP0 725 aa26.74■■□□□ 1.87
SAMD1-202ENST00000533683 OR4N5Q8IXE1 308 aa26.74■■□□□ 1.87
SAMD1-202ENST00000533683 TMEFF1Q8IYR6 380 aa26.74■■□□□ 1.87
SAMD1-202ENST00000533683 OR4K14Q8NGD5 310 aa26.74■■□□□ 1.87
SAMD1-202ENST00000533683 ZDHHC1Q8WTX9 485 aa26.74■■□□□ 1.87
SAMD1-202ENST00000533683 DCUN1D5Q9BTE7 237 aa26.74■■□□□ 1.87
SAMD1-202ENST00000533683 LRRC61Q9BV99 259 aa26.74■■□□□ 1.87
SAMD1-202ENST00000533683 SPATA5L1Q9BVQ7 753 aa26.74■■□□□ 1.87
SAMD1-202ENST00000533683 SLC22A7Q9Y694 548 aa26.74■■□□□ 1.87
SAMD1-202ENST00000533683 A0A0G2JPF8 293 aa26.74■■□□□ 1.87
SAMD1-202ENST00000533683 HNRNPCL2B2RXH8 293 aa26.74■■□□□ 1.87
SAMD1-202ENST00000533683 HNRNPCL3B7ZW38 293 aa26.74■■□□□ 1.87
SAMD1-202ENST00000533683 TMX2-CTNND1H3BSU7 103 aa26.74■■□□□ 1.87
SAMD1-202ENST00000533683 M0R3H8 397 aa26.74■■□□□ 1.87
SAMD1-202ENST00000533683 ZNF217O75362 1048 aa26.74■■□□□ 1.87
SAMD1-202ENST00000533683 EPPINO95925 133 aa26.74■■□□□ 1.87
SAMD1-202ENST00000533683 HNRNPCL4P0DMR1 293 aa26.74■■□□□ 1.87
SAMD1-202ENST00000533683 ZNF10P21506 573 aaPredicted RBP26.74■■□□□ 1.87
SAMD1-202ENST00000533683 ELAVL4P26378 380 aaKnown RBP26.74■■□□□ 1.87
SAMD1-202ENST00000533683 MAPK10P53779 464 aa26.74■■□□□ 1.87
SAMD1-202ENST00000533683 SEC23BQ15437 767 aa26.74■■□□□ 1.87
SAMD1-202ENST00000533683 PRSS41Q7RTY9 318 aa26.74■■□□□ 1.87
SAMD1-202ENST00000533683 FAR1Q8WVX9 515 aa26.74■■□□□ 1.87
SAMD1-202ENST00000533683 RSC1A1Q92681 617 aa26.74■■□□□ 1.87
SAMD1-202ENST00000533683 COL26A1Q96A83 441 aa26.74■■□□□ 1.87
SAMD1-202ENST00000533683 BTBD2Q9BX70 525 aa26.74■■□□□ 1.87
SAMD1-202ENST00000533683 OR5K3A6NET4 321 aa26.73■■□□□ 1.87
SAMD1-202ENST00000533683 TRIM64BA6NI03 449 aa26.73■■□□□ 1.87
SAMD1-202ENST00000533683 ZSCAN9O15535 394 aaPredicted RBP26.73■■□□□ 1.87
SAMD1-202ENST00000533683 H1F0P07305 194 aaKnown RBP26.73■■□□□ 1.87
SAMD1-202ENST00000533683 TYRP1P17643 537 aa26.73■■□□□ 1.87
SAMD1-202ENST00000533683 TLX1P31314 330 aaPredicted RBP26.73■■□□□ 1.87
SAMD1-202ENST00000533683 SMAD2Q15796 467 aaKnown RBP26.73■■□□□ 1.87
SAMD1-202ENST00000533683 KLHL17Q6TDP4 642 aa26.73■■□□□ 1.87
SAMD1-202ENST00000533683 OR7G2Q8NG99 324 aa26.73■■□□□ 1.87
SAMD1-202ENST00000533683 MS4A12Q9NXJ0 267 aa26.73■■□□□ 1.87
SAMD1-202ENST00000533683 TMCC3Q9ULS5 477 aa26.73■■□□□ 1.87
SAMD1-202ENST00000533683 IDH2P48735 452 aaKnown RBP26.73■■□□□ 1.87
SAMD1-202ENST00000533683 GP2P55259 537 aaKnown RBP26.73■■□□□ 1.87
SAMD1-202ENST00000533683 FZD5Q13467 585 aa26.73■■□□□ 1.87
SAMD1-202ENST00000533683 C6orf132Q5T0Z8 1188 aa26.73■■□□□ 1.87
SAMD1-202ENST00000533683 OOSP2Q86WS3 158 aa26.73■■□□□ 1.87
SAMD1-202ENST00000533683 DEFB119Q8N690 84 aa26.73■■□□□ 1.87
SAMD1-202ENST00000533683 RHOXF1Q8NHV9 184 aa26.73■■□□□ 1.87
SAMD1-202ENST00000533683 A4GNTQ9UNA3 340 aa26.73■■□□□ 1.87
SAMD1-202ENST00000533683 SCN2AQ99250 2005 aa26.72■■□□□ 1.87
SAMD1-202ENST00000533683 TMEM265A0A087WTH1 108 aa26.72■■□□□ 1.87
SAMD1-202ENST00000533683 B4DGG1 531 aa26.72■■□□□ 1.87
SAMD1-202ENST00000533683 ASNA1O43681 348 aa26.72■■□□□ 1.87
SAMD1-202ENST00000533683 PRAMEF8Q5VWM4 474 aa26.72■■□□□ 1.87
SAMD1-202ENST00000533683 PRAMEF7Q5VXH5 474 aa26.72■■□□□ 1.87
SAMD1-202ENST00000533683 FAM111BQ6SJ93 734 aa26.72■■□□□ 1.87
SAMD1-202ENST00000533683 SAMD14Q8IZD0 417 aaPredicted RBP26.72■■□□□ 1.87
SAMD1-202ENST00000533683 SHISA5Q8N114 240 aa26.72■■□□□ 1.87
SAMD1-202ENST00000533683 ACTRT3Q9BYD9 372 aa26.72■■□□□ 1.87
SAMD1-202ENST00000533683 QRSL1Q9H0R6 528 aaKnown RBP26.72■■□□□ 1.87
SAMD1-202ENST00000533683 NTMQ9P121 344 aa26.72■■□□□ 1.87
SAMD1-202ENST00000533683 LGI1O95970 557 aa26.71■■□□□ 1.87
SAMD1-202ENST00000533683 MT-ND2P03891 347 aa26.71■■□□□ 1.87
SAMD1-202ENST00000533683 MAP2K4P45985 399 aa26.71■■□□□ 1.87
SAMD1-202ENST00000533683 PIN1Q13526 163 aaPredicted RBP26.71■■□□□ 1.87
SAMD1-202ENST00000533683 LRIT3Q3SXY7 679 aa26.71■■□□□ 1.87
SAMD1-202ENST00000533683 DCST1Q5T197 706 aa26.71■■□□□ 1.87
SAMD1-202ENST00000533683 COL13A1Q5TAT6 717 aaPredicted RBP26.71■■□□□ 1.87
SAMD1-202ENST00000533683 WDR53Q7Z5U6 358 aaPredicted RBP26.71■■□□□ 1.87
SAMD1-202ENST00000533683 P3H2Q8IVL5 708 aa26.71■■□□□ 1.87
SAMD1-202ENST00000533683 CCDC103Q8IW40 242 aa26.71■■□□□ 1.87
SAMD1-202ENST00000533683 SLC38A1Q9H2H9 487 aa26.71■■□□□ 1.87
SAMD1-202ENST00000533683 LYRM4Q9HD34 91 aa26.71■■□□□ 1.87
SAMD1-202ENST00000533683 CCNB1IP1Q9NPC3 277 aa26.71■■□□□ 1.87
SAMD1-202ENST00000533683 A0A1W2PPW3 197 aa26.71■■□□□ 1.87
SAMD1-202ENST00000533683 ZNF99A8MXY4 864 aaPredicted RBP26.71■■□□□ 1.87
SAMD1-202ENST00000533683 RGS10O43665 173 aa26.71■■□□□ 1.87
SAMD1-202ENST00000533683 NOL3O60936 208 aaKnown RBP26.71■■□□□ 1.87
SAMD1-202ENST00000533683 CSNK2BP67870 215 aa26.71■■□□□ 1.87
SAMD1-202ENST00000533683 PTGES3Q15185 160 aaKnown RBP26.71■■□□□ 1.87
SAMD1-202ENST00000533683 NLGN4XQ8N0W4 816 aa26.71■■□□□ 1.87
SAMD1-202ENST00000533683 ZNF655Q8N720 491 aaPredicted RBP26.71■■□□□ 1.87
SAMD1-202ENST00000533683 ZNF226Q9NYT6 803 aa26.71■■□□□ 1.87
SAMD1-202ENST00000533683 WARS2Q9UGM6 360 aaKnown RBP26.71■■□□□ 1.87
SAMD1-202ENST00000533683 ENOPH1Q9UHY7 261 aa26.71■■□□□ 1.87
SAMD1-202ENST00000533683 DUSP12Q9UNI6 340 aa26.71■■□□□ 1.87
SAMD1-202ENST00000533683 SLC9A8Q9Y2E8 581 aa26.71■■□□□ 1.87
SAMD1-202ENST00000533683 HCRTR1O43613 425 aa26.7■■□□□ 1.87
SAMD1-202ENST00000533683 MASP1P48740 699 aa26.7■■□□□ 1.87
SAMD1-202ENST00000533683 MANEAQ5SRI9 462 aa26.7■■□□□ 1.87
SAMD1-202ENST00000533683 USP53Q70EK8 1073 aa26.7■■□□□ 1.87
SAMD1-202ENST00000533683 RBM12BQ8IXT5 1001 aaKnown RBP26.7■■□□□ 1.87
SAMD1-202ENST00000533683 CSNK1A1LQ8N752 337 aa26.7■■□□□ 1.87
SAMD1-202ENST00000533683 OR6T1Q8NGN1 323 aa26.7■■□□□ 1.87
SAMD1-202ENST00000533683 FAM174AQ8TBP5 190 aa26.7■■□□□ 1.87
SAMD1-202ENST00000533683 IPCEF1Q8WWN9 437 aaPredicted RBP26.7■■□□□ 1.87
SAMD1-202ENST00000533683 FUZQ9BT04 418 aa26.7■■□□□ 1.87
SAMD1-202ENST00000533683 TIMMDC1Q9NPL8 285 aa26.7■■□□□ 1.87
SAMD1-202ENST00000533683 PRDM9Q9NQV7 894 aa26.7■■□□□ 1.87
SAMD1-202ENST00000533683 WNT1P04628 370 aa26.7■■□□□ 1.86
SAMD1-202ENST00000533683 CHRNEQ04844 493 aa26.7■■□□□ 1.86
SAMD1-202ENST00000533683 AHSA2Q719I0 299 aa26.7■■□□□ 1.86
SAMD1-202ENST00000533683 SIMC1Q8NDZ2 872 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms