RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 MTBPQ96DY7 904 aa6.51□□□□□ -1.37
TRIM53CP-201ENST00000531490 FAR2Q96K12 515 aa6.51□□□□□ -1.37
TRIM53CP-201ENST00000531490 KCNC2Q96PR1 638 aa6.51□□□□□ -1.37
TRIM53CP-201ENST00000531490 OR1F2PQ96R84 312 aa6.51□□□□□ -1.37
TRIM53CP-201ENST00000531490 CSF3RQ99062 836 aa6.51□□□□□ -1.37
TRIM53CP-201ENST00000531490 NPAS2Q99743 824 aa6.51□□□□□ -1.37
TRIM53CP-201ENST00000531490 CCDC77Q9BR77 488 aa6.51□□□□□ -1.37
TRIM53CP-201ENST00000531490 NTMT1Q9BV86 223 aa6.51□□□□□ -1.37
TRIM53CP-201ENST00000531490 MS4A8Q9BY19 250 aa6.51□□□□□ -1.37
TRIM53CP-201ENST00000531490 ACTR8Q9H981 624 aa6.51□□□□□ -1.37
TRIM53CP-201ENST00000531490 PSMC3IPQ9P2W1 217 aaPredicted RBP6.51□□□□□ -1.37
TRIM53CP-201ENST00000531490 FETUBQ9UGM5 382 aa6.51□□□□□ -1.37
TRIM53CP-201ENST00000531490 FBXL7Q9UJT9 491 aa6.51□□□□□ -1.37
TRIM53CP-201ENST00000531490 DAPP1Q9UN19 280 aa6.51□□□□□ -1.37
TRIM53CP-201ENST00000531490 TNPO3Q9Y5L0 923 aaKnown RBP6.51□□□□□ -1.37
TRIM53CP-201ENST00000531490 FLNAP21333 2647 aaKnown RBP6.51□□□□□ -1.37
TRIM53CP-201ENST00000531490 NUP214P35658 2090 aaPredicted RBP6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 IGKV3D-11A0A0A0MRZ8 115 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 TRAV17A0A0B4J275 112 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 G3V2L1 256 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 H0YIV9 168 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 STX16-NPEPL1H3BU86 382 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 PLPP1O14494 284 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 STX16O14662 325 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 SMIM24O75264 130 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 EEDO75530 441 aaKnown RBP6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 PRKRAO75569 313 aaKnown RBP6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 SUPT7LO94864 414 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 CLDN9O95484 217 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 CLDN14O95500 239 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 WDPCPO95876 746 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 PLA2G1BP04054 148 aaKnown RBP6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 GBAP04062 536 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 SERPINA7P05543 415 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 RNH1P13489 461 aaKnown RBP6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 CD99P14209 185 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 CREB1P16220 341 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 KRT4P19013 534 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 CAPN3P20807 821 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 IMPDH1P20839 514 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 OR4D2P58180 307 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 ACTN3Q08043 901 aaPredicted RBP6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 TRAF3Q13114 568 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 SLAMF1Q13291 335 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 BTBD16Q32M84 506 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 SGO1Q5FBB7 561 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 ZNF678Q5SXM1 525 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 KHDRBS2Q5VWX1 349 aaKnown RBP6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 OR4C11Q6IEV9 310 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 TRIM40Q6P9F5 258 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 C3P1Q6ZMU1 363 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 MILR1Q7Z6M3 343 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 CLNKQ7Z7G1 428 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 TDRPQ86YL5 185 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 OR4N5Q8IXE1 308 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 C4orf33Q8N1A6 199 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 Q8N1Y9 231 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 KIF2BQ8N4N8 673 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 FAM47BQ8NA70 645 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 NFAM1Q8NET5 270 aaPredicted RBP6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 TRPC4APQ8TEL6 797 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 ZNF483Q8TF39 744 aaPredicted RBP6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 C14orf79Q96F83 325 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 CMTM7Q96FZ5 175 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 TMEM237Q96Q45 408 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 LMF1Q96S06 567 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 SERINC2Q96SA4 455 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 TUBB6Q9BUF5 446 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 C1QTNF3Q9BXJ4 246 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 ZNF717Q9BY31 904 aaPredicted RBP6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 DMRT3Q9NQL9 472 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 STMN3Q9NZ72 180 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 DCDC2Q9UHG0 476 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 FBXW2Q9UKT8 454 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 X6R8D5 127 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 FREM3P0C091 2139 aa6.5□□□□□ -1.37
TRIM53CP-201ENST00000531490 COL6A5A8TX70 2615 aa6.49□□□□□ -1.37
TRIM53CP-201ENST00000531490 TCRBV16S1A1N1A0A5B0 115 aa6.49□□□□□ -1.37
TRIM53CP-201ENST00000531490 DYTNA2CJ06 578 aa6.49□□□□□ -1.37
TRIM53CP-201ENST00000531490 GOLGA6L10A6NI86 522 aa6.49□□□□□ -1.37
TRIM53CP-201ENST00000531490 UBFD1O14562 309 aaKnown RBP6.49□□□□□ -1.37
TRIM53CP-201ENST00000531490 B3GALT2O43825 422 aa6.49□□□□□ -1.37
TRIM53CP-201ENST00000531490 TMPRSS11DO60235 418 aa6.49□□□□□ -1.37
TRIM53CP-201ENST00000531490 LDB3O75112 727 aa6.49□□□□□ -1.37
TRIM53CP-201ENST00000531490 OR4F21O95013 312 aa6.49□□□□□ -1.37
TRIM53CP-201ENST00000531490 GSTA1P08263 222 aa6.49□□□□□ -1.37
TRIM53CP-201ENST00000531490 RPS17P08708 135 aaKnown RBP6.49□□□□□ -1.37
TRIM53CP-201ENST00000531490 ICAM2P13598 275 aa6.49□□□□□ -1.37
TRIM53CP-201ENST00000531490 CD1EP15812 388 aa6.49□□□□□ -1.37
TRIM53CP-201ENST00000531490 CHN1P15882 459 aa6.49□□□□□ -1.37
TRIM53CP-201ENST00000531490 KRT15P19012 456 aa6.49□□□□□ -1.37
TRIM53CP-201ENST00000531490 HIST1H1TP22492 207 aaPredicted RBP6.49□□□□□ -1.37
TRIM53CP-201ENST00000531490 PTX3P26022 381 aaPredicted RBP6.49□□□□□ -1.37
TRIM53CP-201ENST00000531490 GSTM2P28161 218 aa6.49□□□□□ -1.37
TRIM53CP-201ENST00000531490 BSGP35613 385 aa6.49□□□□□ -1.37
TRIM53CP-201ENST00000531490 ARL1P40616 181 aaPredicted RBP6.49□□□□□ -1.37
TRIM53CP-201ENST00000531490 PIK3CBP42338 1070 aa6.49□□□□□ -1.37
TRIM53CP-201ENST00000531490 GPR143P51810 404 aa6.49□□□□□ -1.37
TRIM53CP-201ENST00000531490 CCNG1P51959 295 aa6.49□□□□□ -1.37
TRIM53CP-201ENST00000531490 SMSP52788 366 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms