RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 KRTAP24-1Q3LI83 254 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 MSS51Q4VC12 460 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 PAGE2BQ5JRK9 111 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 GPSM1Q86YR5 675 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 TMEM139Q8IV31 216 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 NKAPQ8N5F7 415 aaKnown RBP10.53□□□□□ -0.72
SDCBP-211ENST00000523441 NAT8LQ8N9F0 302 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 ZNF610Q8N9Z0 462 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 ZNF473Q8WTR7 871 aaKnown RBP10.53□□□□□ -0.72
SDCBP-211ENST00000523441 GTPBP3Q969Y2 492 aaKnown RBP10.53□□□□□ -0.72
SDCBP-211ENST00000523441 PDLIM5Q96HC4 596 aaKnown RBP10.53□□□□□ -0.72
SDCBP-211ENST00000523441 SLC39A3Q9BRY0 314 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 CAPS2Q9BXY5 557 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 ACTR8Q9H981 624 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 LZTFL1Q9NQ48 299 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 TAS2R10Q9NYW0 307 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 CD274Q9NZQ7 290 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 PHF11Q9UIL8 331 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 DKKL1Q9UK85 242 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 CHMP2BQ9UQN3 213 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 DTX4Q9Y2E6 619 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 SLC22A20A6NK97 555 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 A8MV72 311 aaPredicted RBP10.52□□□□□ -0.73
SDCBP-211ENST00000523441 SEC14L5O43304 696 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 CD5LO43866 347 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 NT5EP21589 574 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 DPP4P27487 766 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 ABCD3P28288 659 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 LHX2P50458 406 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 NEK2P51955 445 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 TAS2R39P59534 338 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 CDKL1Q00532 357 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 FAPQ12884 760 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 SPRED3Q2MJR0 410 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 C6orf163Q5TEZ5 329 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 KHDRBS2Q5VWX1 349 aaKnown RBP10.52□□□□□ -0.73
SDCBP-211ENST00000523441 CYP20A1Q6UW02 462 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 ADAMTSL2Q86TH1 951 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 PPIL6Q8IXY8 311 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 SPC24Q8NBT2 197 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 ADCY4Q8NFM4 1077 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 FIG4Q92562 907 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 AKAP1Q92667 903 aaKnown RBP eCLIP10.52□□□□□ -0.73
SDCBP-211ENST00000523441 NTNG2Q96CW9 530 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 PLPPR2Q96GM1 343 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 MS4A14Q96JA4 679 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 MTERF1Q99551 399 aaKnown RBP10.52□□□□□ -0.73
SDCBP-211ENST00000523441 EFCAB11Q9BUY7 163 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 NXF5Q9H1B4 397 aaKnown RBP10.52□□□□□ -0.73
SDCBP-211ENST00000523441 OR10A5Q9H207 317 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 CNOT10Q9H9A5 744 aaKnown RBP10.52□□□□□ -0.73
SDCBP-211ENST00000523441 MOCS1Q9NZB8 636 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 GPRC5BQ9NZH0 403 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 BCAP29Q9UHQ4 241 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 PSAT1Q9Y617 370 aa10.52□□□□□ -0.73
SDCBP-211ENST00000523441 C17orf51A8MQB3 221 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 H0YC42 278 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 CLOCKO15516 846 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 GPRIN2O60269 458 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 ADAM11O75078 769 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 EEDO75530 441 aaKnown RBP10.51□□□□□ -0.73
SDCBP-211ENST00000523441 PPM1BO75688 479 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 STK16O75716 305 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 PIAS1O75925 651 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 S100BP04271 92 aaPredicted RBP10.51□□□□□ -0.73
SDCBP-211ENST00000523441 THBDP07204 575 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 ABCB1P08183 1280 aaPredicted RBP10.51□□□□□ -0.73
SDCBP-211ENST00000523441 NR2F6P10588 404 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 TPD52P55327 224 aaPredicted RBP10.51□□□□□ -0.73
SDCBP-211ENST00000523441 CLDN18P56856 261 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 PLCXD2Q0VAA5 305 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 LAPTM5Q13571 262 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 EXOSC7Q15024 291 aaKnown RBP10.51□□□□□ -0.73
SDCBP-211ENST00000523441 TMEM35AQ53FP2 167 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 MED27Q6P2C8 311 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 CCDC137Q6PK04 289 aaKnown RBP10.51□□□□□ -0.73
SDCBP-211ENST00000523441 ADGRE4PQ86SQ3 457 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 ANKMY2Q8IV38 441 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 CNTN4Q8IWV2 1026 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 GALNT12Q8IXK2 581 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 WDSUB1Q8N9V3 476 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 TP53INP1Q96A56 240 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 RGMAQ96B86 450 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 OMA1Q96E52 524 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 CMTM7Q96FZ5 175 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 MARK4Q96L34 752 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 PELOQ9BRX2 385 aaKnown RBP10.51□□□□□ -0.73
SDCBP-211ENST00000523441 C19orf24Q9BVV8 132 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 BRINP2Q9C0B6 783 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 PITHD1Q9GZP4 211 aaPredicted RBP10.51□□□□□ -0.73
SDCBP-211ENST00000523441 EHD1Q9H4M9 534 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 CAB39LQ9H9S4 337 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 ZNF701Q9NV72 531 aaPredicted RBP10.51□□□□□ -0.73
SDCBP-211ENST00000523441 MS4A12Q9NXJ0 267 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 FBXL2Q9UKC9 423 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 PROCRQ9UNN8 238 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 IKBKGQ9Y6K9 419 aa10.51□□□□□ -0.73
SDCBP-211ENST00000523441 A0A1W2PR48 441 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 PRAMEF25A6NGN4 478 aa10.5□□□□□ -0.73
SDCBP-211ENST00000523441 PLPP1O14494 284 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms