RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 CIB2O75838 187 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 TNFSF15O95150 251 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 PSMG1O95456 288 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 HEXBP07686 556 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 HTR1EP28566 365 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 SLC5A2P31639 672 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 SOX18P35713 384 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 KHKP50053 298 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 CORO7P57737 925 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 MGAT2Q10469 447 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 TP53BP2Q13625 1128 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 RGNQ15493 299 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 FXNQ16595 210 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 MLIPQ5VWP3 458 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 LCN10Q6JVE6 187 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 ERICH5Q6P6B1 374 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 C6orf120Q7Z4R8 191 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 PTRH1Q86Y79 214 aaKnown RBP12.2□□□□□ -0.46
CPNE3-205ENST00000522240 HPS6Q86YV9 775 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 NUP43Q8NFH3 380 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 TNIP2Q8NFZ5 429 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 OR7G2Q8NG99 324 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 OR10A6Q8NH74 314 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 KAT2AQ92830 837 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 ASB9Q96DX5 294 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 RNF31Q96EP0 1072 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 RBM18Q96H35 190 aaKnown RBP12.2□□□□□ -0.46
CPNE3-205ENST00000522240 REXO5Q96IC2 774 aaKnown RBP12.2□□□□□ -0.46
CPNE3-205ENST00000522240 ART5Q96L15 291 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 KCTD14Q9BQ13 255 aaPredicted RBP12.2□□□□□ -0.46
CPNE3-205ENST00000522240 CRB3Q9BUF7 120 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 THUMPD1Q9NXG2 353 aaKnown RBP12.2□□□□□ -0.46
CPNE3-205ENST00000522240 PADI1Q9ULC6 663 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 PADI2Q9Y2J8 665 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 FASNP49327 2511 aaKnown RBP12.2□□□□□ -0.46
CPNE3-205ENST00000522240 PKD1L2Q7Z442 2459 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 SEC16AO15027 2179 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 TEX51A0A1B0GUA7 166 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 FAM149AA5PLN7 773 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 CDRT15L2A8MXV6 281 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 STMND1H3BQB6 276 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 UPK1AO00322 258 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 ALOX12BO75342 701 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 BCAS2O75934 225 aaPredicted RBP12.19□□□□□ -0.46
CPNE3-205ENST00000522240 DXOO77932 396 aaKnown RBP12.19□□□□□ -0.46
CPNE3-205ENST00000522240 IFNA16P05015 189 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 CT62P0C5K7 136 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 CCNYL3P0C7X3 344 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 PTGER1P34995 402 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 PRIM2P49643 509 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 GZMMP51124 257 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 EMP2P54851 167 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 MRPS35P82673 323 aaKnown RBP12.19□□□□□ -0.46
CPNE3-205ENST00000522240 RBBP4Q09028 425 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 TRAP1Q12931 704 aaKnown RBP12.19□□□□□ -0.46
CPNE3-205ENST00000522240 NSDHLQ15738 373 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 CYP51A1Q16850 503 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 ZCCHC12Q6PEW1 402 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 FAM111BQ6SJ93 734 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 ANGPTL8Q6UXH0 198 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 TIPARPQ7Z3E1 657 aaKnown RBP12.19□□□□□ -0.46
CPNE3-205ENST00000522240 SZRD1Q7Z422 152 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 RNF130Q86XS8 419 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 PRSS58Q8IYP2 241 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 LGI4Q8N135 537 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 CLEC4FQ8N1N0 589 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 FAM13CQ8NE31 585 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 ADCY4Q8NFM4 1077 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 OR2T12Q8NG77 320 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 OR14A16Q8NHC5 309 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 PNPT1Q8TCS8 783 aaKnown RBP12.19□□□□□ -0.46
CPNE3-205ENST00000522240 RIT1Q92963 219 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 CCDC124Q96CT7 223 aaKnown RBP12.19□□□□□ -0.46
CPNE3-205ENST00000522240 GIMAP5Q96F15 307 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 FBXL20Q96IG2 436 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 ZNF583Q96ND8 569 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 SOX17Q9H6I2 414 aaPredicted RBP12.19□□□□□ -0.46
CPNE3-205ENST00000522240 AKIRIN1Q9H9L7 192 aaPredicted RBP12.19□□□□□ -0.46
CPNE3-205ENST00000522240 GPATCH2Q9NW75 528 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 C19orf25Q9UFG5 118 aaPredicted RBP12.19□□□□□ -0.46
CPNE3-205ENST00000522240 MAGEL2Q9UJ55 1249 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 C3orf18Q9UK00 162 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 PACSIN3Q9UKS6 424 aa12.19□□□□□ -0.46
CPNE3-205ENST00000522240 RRP15Q9Y3B9 282 aaKnown RBP12.19□□□□□ -0.46
CPNE3-205ENST00000522240 SDK2Q58EX2 2172 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 MYOCOSA0A1B0GUC4 107 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 ELOVL7A1L3X0 281 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 OR2W5A6NFC9 320 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 C21orf140B9A014 251 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 ASNA1O43681 348 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 BRINP1O60477 761 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 PRAMEF2O60811 474 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 TNFRSF21O75509 655 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 CBX7O95931 251 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 HMGN2P05204 90 aaKnown RBP12.18□□□□□ -0.46
CPNE3-205ENST00000522240 ETFAP13804 333 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 RBMS1P29558 406 aaKnown RBP12.18□□□□□ -0.46
CPNE3-205ENST00000522240 STAT5AP42229 794 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 FUT7Q11130 342 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms