RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 LRIF1Q5T3J3 769 aa22.47■■□□□ 1.19
PVT1-212ENST00000521951 CLEC4FQ8N1N0 589 aa22.47■■□□□ 1.19
PVT1-212ENST00000521951 NUP43Q8NFH3 380 aa22.47■■□□□ 1.19
PVT1-212ENST00000521951 OR52R1Q8NGF1 315 aa22.47■■□□□ 1.19
PVT1-212ENST00000521951 OR5AK3PQ8NH89 298 aa22.47■■□□□ 1.19
PVT1-212ENST00000521951 SFXN5Q8TD22 340 aa22.47■■□□□ 1.19
PVT1-212ENST00000521951 VMP1Q96GC9 406 aa22.47■■□□□ 1.19
PVT1-212ENST00000521951 FER1L6-AS2Q96M78 137 aa22.47■■□□□ 1.19
PVT1-212ENST00000521951 PHF12Q96QT6 1004 aa22.47■■□□□ 1.19
PVT1-212ENST00000521951 COPS7AQ9UBW8 275 aa22.47■■□□□ 1.19
PVT1-212ENST00000521951 TAGLN3Q9UI15 199 aa22.47■■□□□ 1.19
PVT1-212ENST00000521951 ZNF223Q9UK11 482 aaPredicted RBP22.47■■□□□ 1.19
PVT1-212ENST00000521951 POLHQ9Y253 713 aa22.47■■□□□ 1.19
PVT1-212ENST00000521951 DMXL2Q8TDJ6 3036 aa22.47■■□□□ 1.19
PVT1-212ENST00000521951 MED13Q9UHV7 2174 aa22.47■■□□□ 1.19
PVT1-212ENST00000521951 A0A087WV48 116 aa22.47■■□□□ 1.19
PVT1-212ENST00000521951 ERN1O75460 977 aaKnown RBP22.47■■□□□ 1.19
PVT1-212ENST00000521951 BCAS2O75934 225 aaPredicted RBP22.47■■□□□ 1.19
PVT1-212ENST00000521951 ZCCHC18P0CG32 403 aa22.47■■□□□ 1.19
PVT1-212ENST00000521951 ICAM2P13598 275 aa22.47■■□□□ 1.19
PVT1-212ENST00000521951 HOXB9P17482 250 aaPredicted RBP22.47■■□□□ 1.19
PVT1-212ENST00000521951 Q0VFX4 171 aa22.47■■□□□ 1.19
PVT1-212ENST00000521951 GTDC1Q4AE62 458 aa22.47■■□□□ 1.19
PVT1-212ENST00000521951 DLEU7Q6UYE1 221 aa22.47■■□□□ 1.19
PVT1-212ENST00000521951 RNF111Q6ZNA4 994 aa22.47■■□□□ 1.19
PVT1-212ENST00000521951 KDF1Q8NAX2 398 aaPredicted RBP22.47■■□□□ 1.19
PVT1-212ENST00000521951 ELP5Q8TE02 316 aa22.47■■□□□ 1.19
PVT1-212ENST00000521951 ZCCHC3Q9NUD5 404 aaKnown RBP22.47■■□□□ 1.19
PVT1-212ENST00000521951 PCDHB14Q9Y5E9 798 aa22.47■■□□□ 1.19
PVT1-212ENST00000521951 ZFHX4Q86UP3 3567 aa22.46■■□□□ 1.19
PVT1-212ENST00000521951 CBX6O95503 412 aa22.46■■□□□ 1.19
PVT1-212ENST00000521951 PRKAG1P54619 331 aa22.46■■□□□ 1.19
PVT1-212ENST00000521951 PRR5P85299 388 aa22.46■■□□□ 1.19
PVT1-212ENST00000521951 NFYCQ13952 458 aa22.46■■□□□ 1.19
PVT1-212ENST00000521951 SZRD1Q7Z422 152 aa22.46■■□□□ 1.19
PVT1-212ENST00000521951 DHDDSQ86SQ9 333 aa22.46■■□□□ 1.19
PVT1-212ENST00000521951 KIF2BQ8N4N8 673 aa22.46■■□□□ 1.19
PVT1-212ENST00000521951 TRIML2Q8N7C3 387 aa22.46■■□□□ 1.19
PVT1-212ENST00000521951 PCYOX1LQ8NBM8 494 aa22.46■■□□□ 1.19
PVT1-212ENST00000521951 DNAJB8Q8NHS0 232 aa22.46■■□□□ 1.19
PVT1-212ENST00000521951 MOAP1Q96BY2 351 aa22.46■■□□□ 1.19
PVT1-212ENST00000521951 NSL1Q96IY1 281 aa22.46■■□□□ 1.19
PVT1-212ENST00000521951 SLC35A5Q9BS91 424 aa22.46■■□□□ 1.19
PVT1-212ENST00000521951 IL1RL2Q9HB29 575 aa22.46■■□□□ 1.19
PVT1-212ENST00000521951 MMP25Q9NPA2 562 aa22.46■■□□□ 1.19
PVT1-212ENST00000521951 RNF103-CHMP3A0A140T963 221 aa22.45■■□□□ 1.18
PVT1-212ENST00000521951 ARGFXA6NJG6 315 aa22.45■■□□□ 1.18
PVT1-212ENST00000521951 AIM2O14862 343 aa22.45■■□□□ 1.18
PVT1-212ENST00000521951 PRAMEF2O60811 474 aa22.45■■□□□ 1.18
PVT1-212ENST00000521951 NME6O75414 186 aaPredicted RBP22.45■■□□□ 1.18
PVT1-212ENST00000521951 PSMG1O95456 288 aa22.45■■□□□ 1.18
PVT1-212ENST00000521951 CPA2P48052 419 aa22.45■■□□□ 1.18
PVT1-212ENST00000521951 EMDP50402 254 aa22.45■■□□□ 1.18
PVT1-212ENST00000521951 CLCN2P51788 898 aa22.45■■□□□ 1.18
PVT1-212ENST00000521951 C6orf89Q6UWU4 347 aa22.45■■□□□ 1.18
PVT1-212ENST00000521951 MSRB3Q8IXL7 192 aa22.45■■□□□ 1.18
PVT1-212ENST00000521951 TMEM102Q8N9M5 508 aaPredicted RBP22.45■■□□□ 1.18
PVT1-212ENST00000521951 OR56A1Q8NGH5 318 aa22.45■■□□□ 1.18
PVT1-212ENST00000521951 C16orf52Q8NHV5 167 aa22.45■■□□□ 1.18
PVT1-212ENST00000521951 EPS8L2Q9H6S3 715 aa22.45■■□□□ 1.18
PVT1-212ENST00000521951 EFCAB1Q9HAE3 211 aa22.45■■□□□ 1.18
PVT1-212ENST00000521951 CPNE5Q9HCH3 593 aa22.45■■□□□ 1.18
PVT1-212ENST00000521951 ATP13A2Q9NQ11 1180 aa22.45■■□□□ 1.18
PVT1-212ENST00000521951 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.45■■□□□ 1.18
PVT1-212ENST00000521951 SLC25A37Q9NYZ2 338 aa22.45■■□□□ 1.18
PVT1-212ENST00000521951 VAPAQ9P0L0 249 aa22.45■■□□□ 1.18
PVT1-212ENST00000521951 DOCK10Q96BY6 2186 aa22.45■■□□□ 1.18
PVT1-212ENST00000521951 GIMAP1-GIMAP5A0A087WTJ2 511 aa22.44■■□□□ 1.18
PVT1-212ENST00000521951 TRBV5-3A0A0A0MS03 114 aa22.44■■□□□ 1.18
PVT1-212ENST00000521951 TRBV11-1A0A0K0K1C0 115 aa22.44■■□□□ 1.18
PVT1-212ENST00000521951 C1QCP02747 245 aa22.44■■□□□ 1.18
PVT1-212ENST00000521951 UCNP55089 124 aa22.44■■□□□ 1.18
PVT1-212ENST00000521951 TP53BP2Q13625 1128 aa22.44■■□□□ 1.18
PVT1-212ENST00000521951 DEFB109BQ30KR1 87 aa22.44■■□□□ 1.18
PVT1-212ENST00000521951 C6orf120Q7Z4R8 191 aa22.44■■□□□ 1.18
PVT1-212ENST00000521951 ZFP90Q8TF47 636 aa22.44■■□□□ 1.18
PVT1-212ENST00000521951 GIMAP5Q96F15 307 aa22.44■■□□□ 1.18
PVT1-212ENST00000521951 ANKRD11Q6UB99 2663 aaPredicted RBP22.44■■□□□ 1.18
PVT1-212ENST00000521951 K7ENP7 123 aa22.43■■□□□ 1.18
PVT1-212ENST00000521951 PRKNO60260 465 aaPredicted RBP22.43■■□□□ 1.18
PVT1-212ENST00000521951 COQ9O75208 318 aa22.43■■□□□ 1.18
PVT1-212ENST00000521951 UBOX5O94941 541 aa22.43■■□□□ 1.18
PVT1-212ENST00000521951 SERPINA7P05543 415 aa22.43■■□□□ 1.18
PVT1-212ENST00000521951 T-ENOLP0DO92 83 aa22.43■■□□□ 1.18
PVT1-212ENST00000521951 ITGAMP11215 1152 aa22.43■■□□□ 1.18
PVT1-212ENST00000521951 ESRRAP11474 423 aaPredicted RBP22.43■■□□□ 1.18
PVT1-212ENST00000521951 RRADP55042 308 aa22.43■■□□□ 1.18
PVT1-212ENST00000521951 AIMP2Q13155 320 aaKnown RBP22.43■■□□□ 1.18
PVT1-212ENST00000521951 TRMT5Q32P41 509 aaKnown RBP22.43■■□□□ 1.18
PVT1-212ENST00000521951 INO80CQ6PI98 192 aaPredicted RBP22.43■■□□□ 1.18
PVT1-212ENST00000521951 HSDL2Q6YN16 418 aa22.43■■□□□ 1.18
PVT1-212ENST00000521951 C9orf40Q8IXQ3 194 aa22.43■■□□□ 1.18
PVT1-212ENST00000521951 KBTBD2Q8IY47 623 aa22.43■■□□□ 1.18
PVT1-212ENST00000521951 AURKBQ96GD4 344 aaPredicted RBP22.43■■□□□ 1.18
PVT1-212ENST00000521951 MS4A4EQ96PG1 132 aa22.43■■□□□ 1.18
PVT1-212ENST00000521951 GPATCH2Q9NW75 528 aa22.43■■□□□ 1.18
PVT1-212ENST00000521951 DTX4Q9Y2E6 619 aa22.43■■□□□ 1.18
PVT1-212ENST00000521951 HEMK1Q9Y5R4 338 aaPredicted RBP22.43■■□□□ 1.18
PVT1-212ENST00000521951 OR6C76A6NM76 312 aa22.42■■□□□ 1.18
PVT1-212ENST00000521951 NPPAP01160 153 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms